AMCG00012168


Basic Information

Item Value
gene id AMCG00012168
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12132247 ~ 12141475 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012168
ATGTATCATGACCAACCAAATTGGCAGTGGTCCAGCAGAGAGGATGTCACCTTCTACAACTGGAAGAAGAACTGGTTCTGTGCTAAATTCAATGCTGAAGGCACCTGGGAGGATGATGTGTGTCAccagacatattttttcatgtgCTACACAAaTGACACATCCATAAATATAACTGAGAGATGGTCCATCCATATGAAACAGAAGACTTGGTATGAAGCACAGGACCACTGCAGAGCTGAGAACAAAGACCTGGCCACCATTTACACTGAGGCAGAAGCTACACGACTAAGCCTACTAAATAAATATGGGAGAATGTGGATCGGGCTGTTCCATGGCCCAGAGAACTGGCAGTGGGTCAGTGGAGAGAGGACCAACTACACCAACTGGAAGACTGATCTCTTCTGTGCTGCAGTGGATTCTGAAGGGTACTGGGAGGATCTAACCTGTTTTGAGCAGCACCCTTTCATGTGCTACACAGGGCTGTTCAACGAGCCCTGGAGTTGGTCCAGTGGTGGGAAGTCATCGTTTAGATACTGGAGAGTAGGTGAACCGGACAACTTTTTAACCAATGAGAGATGTATAATGTTGAATGCAGATAGCACATGGAATGACTATCCCTGTCAGGAAACCCTGGCGTTCTTCTGTGAGGATGATGTGCGAGAGTTAGTCCTGGTGAGGGAGAACAAGACGTGGGAGGAGGCTCTGGATCACTGCCGTGCTCACTACACTGACCTCACCAGCATCGTCTCAGGGAAGGAGCACAACCTCACAGCGCTGACGGCCGCAGACGCCCAGACCCCCCACGTCTGGCTGGGCCTGAGGCAGAGCTTCATAACCCACTCCTGGTTCTGGGTGAACAGGGAGGCCCTGGGGTACCAAAAGTGGGTCCAGGGAGGGCAGCCCCAGTGCCCCCAGTCCAGCTACTGTGGAGCCATGTCCAATACTACTGAGGGCCATGCCTGGACTGACCGGCACTGCGAGGAGAAGCTCAACTTCATCTGCTATAGAGGTAGCTTAGTGCGGCCCAGTGGCCCCCTGCCACAGGGGGAGCTCCACAACCAGGCTGCCTGGGATCGCTGCGGGGCTCTGGGGGCGGCGACTCGGAGACACCCCGCTGTCACTCACTGGAACAACCATTGTGACATCACAGCAAACTACAGCGGCCGCGTTCACACTTCACTCTTCCCACTTCAGAAGAGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012168 True 1206 mRNA 0.53 5 12132247 12141475

Neighbor

gene id symbol gene type direction distance location
AMCG00012167 stx1b,LOC108228377,LOC107397241,LOC102220115,LOC107666328,LOC103393442 coding upstream 36308 12085358 ~ 12095939 (+)
AMCG00012161 NA coding upstream 95725 12033347 ~ 12036522 (+)
AMCG00012162 NA coding upstream 103338 11991515 ~ 12028909 (+)
AMCG00012159 fbxl19,kdm2b,LOC107694447 coding upstream 218293 11901547 ~ 11913954 (+)
AMCG00012155 NA coding upstream 329122 11798577 ~ 11803125 (+)
AMCG00012172 phkg2,LOC106907820,LOC103155081,LOC107089513,LOC101485765 coding downstream 76231 12217706 ~ 12223005 (+)
AMCG00012177 LOC107677883,LOC107563784,LOC107743762,LOC108273672 coding downstream 84839 12226314 ~ 12238811 (+)
AMCG00012178 NA coding downstream 104340 12245815 ~ 12247965 (+)
AMCG00012181 NA coding downstream 257129 12398604 ~ 12403204 (+)
AMCG00012182 NA coding downstream 308236 12449711 ~ 12453677 (+)
G134923 NA non-coding upstream 12587 12119231 ~ 12119660 (+)
G134879 NA non-coding upstream 206116 11924268 ~ 11926131 (+)
G134877 NA non-coding upstream 213982 11916344 ~ 11918265 (+)
G134779 NA non-coding upstream 287415 11819257 ~ 11844832 (+)
G134766 NA non-coding upstream 365836 11711250 ~ 11766411 (+)
G134942 NA non-coding downstream 6592 12148067 ~ 12158458 (+)
G134944 NA non-coding downstream 17743 12159218 ~ 12159429 (+)
G134945 NA non-coding downstream 19120 12160595 ~ 12161253 (+)
G134946 NA non-coding downstream 19983 12161458 ~ 12162298 (+)
G134947 NA non-coding downstream 21781 12163256 ~ 12163563 (+)
G134898 NA other upstream 100757 12030897 ~ 12031490 (+)
AMCG00012152 NA other upstream 261617 11619177 ~ 11870630 (+)
G134743 NA other upstream 686084 11436379 ~ 11446163 (+)
G134697 fus,LOC103040960,LOC107658502 other upstream 838348 11242229 ~ 11293899 (+)
AMCG00012112 NA other upstream 1071217 11049065 ~ 11061030 (+)
G134955 NA other downstream 31063 12172538 ~ 12172802 (+)
G134958 NA other downstream 39586 12181061 ~ 12181320 (+)
G134968 NA other downstream 50080 12191555 ~ 12192408 (+)
G135026 NA other downstream 424737 12566212 ~ 12716115 (+)
G135025 NA other downstream 472498 12613973 ~ 12648812 (+)

Expression


Co-expression Network