AMCG00012178


Basic Information

Item Value
gene id AMCG00012178
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12245815 ~ 12247965 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012178
atgttttatttgtcagaCAACAAATCAAGAAATATCATTGAGAGATGCTCCAACCATACTGAACAGAAGACTTTCTCAGAGGCACAGAAATACTGCAGAGATGAGAACAAAGATCTGGCCACCATTTACACAGAGGCAGAAGCTACACAACTGAGCCAACACTATACATTTGGGAGAAAGTGGATTGGGCTGTACCATGGCCCCGACAACTGGCAGTGGGTCAGTGGAGAGAGGACCAACTACACCAACTGGAAGACTAATCTCTTCTGTGCTGCAGTGGATTTTCAAGGCTCCTGGGAGGATCTAAGCTGTGATGAGGAGCACCCTTTCATGTGCTACACAGACGTGCGAGAGTTAATCCTGGTAAGGGAGAACAAGACGTGGGAGGAGGCTCTGGATCACTGCCGTGCTCACTACACTGACCTCACCAGCATCGTCTCAGAGAAGGAGCACAACCTCACAGCGCTGACAGCCGCAGACGCCCAGACCCCCCACGTCTGGCTGGGCCTGAGGCAGAGCTTCATAACCCGCTCCTGGTTCTGGGTGAACAGGGAGGCCCTGGGATACCAAAAGTGGGTCCAGGGAGGGCAGCCCCAGTGCCCCCAGTACAGCTACTGTGGAGCCATGTCCAATACTACTGAGGACCACGCCTGGACTGACCGGCCCTGTGAGGAGAGACTCAACTTCATCTGCTATAGAGCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012178 True 705 mRNA 0.53 3 12245815 12247965

Neighbor

gene id symbol gene type direction distance location
AMCG00012177 LOC107677883,LOC107563784,LOC107743762,LOC108273672 coding upstream 7004 12226314 ~ 12238811 (+)
AMCG00012172 phkg2,LOC106907820,LOC103155081,LOC107089513,LOC101485765 coding upstream 22810 12217706 ~ 12223005 (+)
AMCG00012168 NA coding upstream 104340 12132247 ~ 12141475 (+)
AMCG00012167 stx1b,LOC108228377,LOC107397241,LOC102220115,LOC107666328,LOC103393442 coding upstream 149876 12085358 ~ 12095939 (+)
AMCG00012161 NA coding upstream 209293 12033347 ~ 12036522 (+)
AMCG00012181 NA coding downstream 150639 12398604 ~ 12403204 (+)
AMCG00012182 NA coding downstream 201746 12449711 ~ 12453677 (+)
AMCG00012187 NA coding downstream 269403 12517368 ~ 12528915 (+)
AMCG00012189 NA coding downstream 293870 12541835 ~ 12548644 (+)
AMCG00012190 NA coding downstream 318676 12566641 ~ 12569000 (+)
G134948 NA non-coding upstream 81619 12163655 ~ 12164196 (+)
G134947 NA non-coding upstream 82252 12163256 ~ 12163563 (+)
G134946 NA non-coding upstream 83517 12161458 ~ 12162298 (+)
G134945 NA non-coding upstream 84562 12160595 ~ 12161253 (+)
G134944 NA non-coding upstream 86386 12159218 ~ 12159429 (+)
G135005 LOC104962440 non-coding downstream 112032 12359997 ~ 12360317 (+)
G135007 NA non-coding downstream 114580 12362545 ~ 12362843 (+)
G135030 NA non-coding downstream 364200 12612165 ~ 12648613 (+)
G135027 NA non-coding downstream 388734 12636699 ~ 12699876 (+)
G135028 NA non-coding downstream 444703 12692668 ~ 12693815 (+)
G134968 NA other upstream 53407 12191555 ~ 12192408 (+)
G134958 NA other upstream 64495 12181061 ~ 12181320 (+)
G134955 NA other upstream 73013 12172538 ~ 12172802 (+)
G134898 NA other upstream 214325 12030897 ~ 12031490 (+)
AMCG00012152 NA other upstream 375185 11619177 ~ 11870630 (+)
G135026 NA other downstream 318247 12566212 ~ 12716115 (+)
G135025 NA other downstream 366008 12613973 ~ 12648812 (+)
AMCG00012191 NA other downstream 454358 12702323 ~ 12724194 (+)
G135037 NA other downstream 522818 12770783 ~ 12777157 (+)
G135038 NA other downstream 536123 12784088 ~ 12786060 (+)

Expression


Co-expression Network