AMCG00012179


Basic Information

Item Value
gene id AMCG00012179
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12318901 ~ 12340418 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012179
ATGTCAAGTGGGCTGTACAGAGATGACAACAATTGGCAATGGTCCAATGGAGAGCAAGTTGCCTTCTATAACTGGAAACGAAACCTGTTTTTTTGCACCAAAGTCAATGAGGACGGCACCTGGGAAGACTCAGCCTGTGATGAGGGGCATCCTTTCGTGTGTTACACAGACACCGCCAATGCTACCCAGAGGTACACCTTTGTGAATCTGGAGAAAAGCTGGCCACAAGCCCAACAGCACTGCAGAGAGCGCAACTCGGACCTGGCCACTATACACAGCCTGAATGAGAATGACGCAGTGAGGGAGAGAGCGCAGGGCAGCGTCTCTTGGATAGGGCTGTTCAACGAGCCCTGGCAGTGGTCCGATGGGGGAAATTCTGTATTTAGACAATGGAAGGCAGGCAAACCAGACTACTACCATGATGAGAACTGTGTTTGCATTGACAACATTCAGTCAGATGGAGACTGGGATGATTGTCTCTGCAGTACTGAAATGGCCTTCTACTGCTGCAGTGGGCTGTTCAACGAGCCCTGGCAGTGGTCCGATGGGGGAAATTCTGTGTTTAGACAATGGAAGGCAGGCAAACCAGATAACTACTACCATAATGAGGACTGTGTTTGCATTGACAACATTCAGTCAGATGGAGACTGGGATGATTATCCCTGCAGTACTAATCTGACCTTCTACTGCTGCAGTGGAAATAGTTCCGTCAGCATCTCTGTAAGGTGTGAGGCTGTCTTGGAGGAGATGACTTGGTCGACCGCCCAGAGCTACTGCAGAGCGCAAGCCAAAGACCTGCCCACCATTTACAATGCAGAGGAGATCCAGCAGCTGTTAGAGATTAATTGTACCGACATGTGTACCCGGTGGATCGGAATGTATAAAGGCAAGCAGAACTGGCTGTGGACCAATGGGGAGAGAGTCAGCTATGCCAACTGGATGACTAGTCAATTCTGTGCTGTCATAGATGTCACAGGGTACTGGATGGACGTACGCTGTTTCGAAAGCTACTCTTTCATTTGCTATACAGTGAGGAGCAGATCTGTGCTCAAGGCGGAGATCACAGCCGGATCTGAGCAGGATCTTAATGACCTGAAAGTCAGTCAAGCTGTGTTACGACAGATCCACCAGCAGCTCTCCCAGCTAGGGATGGGAAATGTGACAATGCAATGGAGGGCGCAGGGAGGGCGGGTCTTCCacaaggaggaggagatgagggGCAAAGGAGATCAGTGTGAGGCCCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012179 True 1248 mRNA 0.51 8 12318901 12340418

Neighbor

gene id symbol gene type direction distance location
AMCG00012180 NA coding downstream 39659 12268225 ~ 12279242 (-)
AMCG00012173 NA coding downstream 92759 12223294 ~ 12226142 (-)
AMCG00012176 NA coding downstream 133075 12181113 ~ 12185826 (-)
AMCG00012175 LOC106579300,LOC106521980 coding downstream 139165 12153169 ~ 12179736 (-)
AMCG00012169 NA coding downstream 171990 12142510 ~ 12146911 (-)
AMCG00012183 NA coding upstream 63574 12403992 ~ 12423343 (-)
AMCG00012184 NA coding upstream 94078 12434496 ~ 12440472 (-)
AMCG00012185 NA coding upstream 143110 12483528 ~ 12504505 (-)
AMCG00012188 NA coding upstream 293319 12633737 ~ 12641612 (-)
AMCG00012195 NA coding upstream 380819 12721237 ~ 12756347 (-)
G135002 NA non-coding downstream 52075 12266603 ~ 12266826 (-)
G134936 NA non-coding downstream 200309 12118340 ~ 12118592 (-)
G134899 NA non-coding downstream 301343 12014352 ~ 12017558 (-)
G134855 NA non-coding downstream 550947 11744894 ~ 11767954 (-)
G135008 NA non-coding upstream 22117 12362535 ~ 12362840 (-)
G135148 NA non-coding upstream 226255 12566673 ~ 12589807 (-)
G135151 NA non-coding upstream 238447 12578865 ~ 12632059 (-)
G135160 NA non-coding upstream 452530 12792948 ~ 12840313 (-)
G135161 NA non-coding upstream 523442 12863860 ~ 12952125 (-)
G134981 NA other downstream 95716 12221205 ~ 12223185 (-)
AMCG00012174 NA other downstream 105102 12190015 ~ 12213799 (-)
AMCG00012170 NA other downstream 196176 12109540 ~ 12122725 (-)
AMCG00012171 NA other downstream 211487 12074004 ~ 12107414 (-)
G134803 NA other downstream 931922 11330466 ~ 11386979 (-)
G135146 NA other upstream 227833 12568251 ~ 13426065 (-)
AMCG00012196 NA other upstream 296675 12637093 ~ 12700730 (-)
G135152 NA other upstream 362032 12702450 ~ 12703485 (-)
AMCG00012197 znf646,LOC107563786,LOC107727719,LOC107665149,LOC107549872,LOC102077593 other upstream 424154 12764572 ~ 12802068 (-)
G135164 NA other upstream 554750 12895168 ~ 12911887 (-)

Expression


Co-expression Network