AMCG00012181


Basic Information

Item Value
gene id AMCG00012181
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12398604 ~ 12403204 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012181
GGAGTGGAAGTCACCTTCTACAACTGGAAGTATAACAGGTTCTGTGCTAAAGTCAATGTTGAAGGCACCTGGGAGGATGATGTCTGTCACCAGCCATACTTTTTCATGTGCTACAGAGGCCTGTTCAATGACCCCTGGAAGTGGTCCAATGGAAGGGAGTCTTTGTTTAGAAACTGGGCACCTGAAAGACCAAGCAATGTCAACAGGTCGCAGGCTTGTGTGCTAATGGAGCCAACATTAGGAAACATCAATATAATTCAGAGATGCTCCATCCATAATGAACAGAAGACTAGGCATGATGCACAGGATTACTGCAGTGCTGAGAACAAAGACCTGGCCACCATTTACGCTGACACAGAGGCTAAGACACTGATCCAACACTATACCCTAGAGAGAAAGTGGATTGGGCTGTACCATGGCCCAGAGAAGTGGCAGTGGGTCAGTGGAGAGAGGGTCAGCTATGCCAACTGGAAGACTAACCTATTCTGTGCTGCAGTGGATTCTGAAGGGTACTGGGAGGATTTAGTCTGTGATGAGCAGCACCCTTTCATGTGCTACACAGATGCGTTAATCCTGGTGAGGGAGAACAAGACGTGGGAGGAGGCTCTGGATCACTGTCACTCTCACTACACTGACCTCGCCAGCATTGTCTCAGAGAAGGAGCACAACCTCACAGCGCTGATGGCCGCAGAGGCACAGACCACCCACGTCTGGCTGGGCCTGAGGCAGAGCTTCATAACCCACTCCTGGTTCTGGGTGAACAGGGAGGTCCTGGGGTACCAAAAGTGGGTCCAGGGAGGGCAGCCCCAGTGCCCCCAGTCCAGATACTGTGGAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012181 True 837 mRNA 0.52 4 12398604 12403204

Neighbor

gene id symbol gene type direction distance location
AMCG00012178 NA coding upstream 150639 12245815 ~ 12247965 (+)
AMCG00012177 LOC107677883,LOC107563784,LOC107743762,LOC108273672 coding upstream 159793 12226314 ~ 12238811 (+)
AMCG00012172 phkg2,LOC106907820,LOC103155081,LOC107089513,LOC101485765 coding upstream 175599 12217706 ~ 12223005 (+)
AMCG00012168 NA coding upstream 257129 12132247 ~ 12141475 (+)
AMCG00012167 stx1b,LOC108228377,LOC107397241,LOC102220115,LOC107666328,LOC103393442 coding upstream 302665 12085358 ~ 12095939 (+)
AMCG00012182 NA coding downstream 46507 12449711 ~ 12453677 (+)
AMCG00012187 NA coding downstream 114164 12517368 ~ 12528915 (+)
AMCG00012189 NA coding downstream 138631 12541835 ~ 12548644 (+)
AMCG00012190 NA coding downstream 163437 12566641 ~ 12569000 (+)
AMCG00012186 NA coding downstream 185726 12588930 ~ 12591372 (+)
G135007 NA non-coding upstream 35761 12362545 ~ 12362843 (+)
G135005 LOC104962440 non-coding upstream 38287 12359997 ~ 12360317 (+)
G134948 NA non-coding upstream 234408 12163655 ~ 12164196 (+)
G134947 NA non-coding upstream 235041 12163256 ~ 12163563 (+)
G134946 NA non-coding upstream 236306 12161458 ~ 12162298 (+)
G135030 NA non-coding downstream 208961 12612165 ~ 12648613 (+)
G135027 NA non-coding downstream 233495 12636699 ~ 12699876 (+)
G135028 NA non-coding downstream 289464 12692668 ~ 12693815 (+)
G135033 NA non-coding downstream 316658 12719862 ~ 12721164 (+)
G135045 NA non-coding downstream 433048 12836252 ~ 12840315 (+)
G134968 NA other upstream 206196 12191555 ~ 12192408 (+)
G134958 NA other upstream 217284 12181061 ~ 12181320 (+)
G134955 NA other upstream 225802 12172538 ~ 12172802 (+)
G134898 NA other upstream 367114 12030897 ~ 12031490 (+)
AMCG00012152 NA other upstream 527974 11619177 ~ 11870630 (+)
G135026 NA other downstream 163008 12566212 ~ 12716115 (+)
G135025 NA other downstream 210769 12613973 ~ 12648812 (+)
AMCG00012191 NA other downstream 299119 12702323 ~ 12724194 (+)
G135037 NA other downstream 367579 12770783 ~ 12777157 (+)
G135038 NA other downstream 380884 12784088 ~ 12786060 (+)

Expression


Co-expression Network