AMCG00012187


Basic Information

Item Value
gene id AMCG00012187
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12517368 ~ 12528915 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012187
ATGGAGAGGAGTGGACTGGCTGTCTTTCTGGTGGCAGAGGAAGTCACCTTCTACAAGTGGAGGAATAACAGATTCTGTGCTAAAGTCAATGTTGAAGGCACTTGGGAGGATGATGTTTGTCACGAGACACACTTTTTCATGTGCTACACAGTGGATTTTGAAGGTTACTGGGAAGATCTAGTTTGTGATAAGGAGCATCCTTTCATGTGCTACACAGATGGGGCAACATCATCCTATCAAAACTGGCATGAAAAGGAGCCAAACAGCTTTCAGAACAATGGGAAATGTGGAGGGTTGCAAGCAACTGGTAAATGGAATGACATTCACTGTAACATAAACCTACCATTCTTGTGCCAGGAAGACTTGCGAGAGTTAATCCTGGTAAGGGAGAACAAGACGTGGGAGGAGGCTCTGGATCACTGCCGCTCTCACTACACTGACCTCACCAGCATCGTCTCAGAGAAGGAGCACATCCTCACAGCACTGATGGCCGCAGATGCCCAGACCCTCCACGTCTGGCTGGGCCTGAGGCAGAGCTTCATAACCCGCTCCTGGTTCTGGGTGAACAGGGAGGTCCTGGGGTACCAAAAGTGGGTCCAGGCAGGGCAGCCCCAGTGCCCCCAGTCCAGCTACTGTGGAGCCATGTCCACTACTACTGAGGACCACGCCTGGACTGACCGgccctgtgaggagaggctCAACTTCATTTGCTTCACAGTGCGGCTCCAGTGTCCCGTCCCCCCCGCCACAGTGGCACAGCagctgcagctccagcagctcTTCATAGCCAGGCCTTCCTGGGATCACTGCGGGACTCTGAGAGCGGCGTCTCCAGGACAAtattataca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012187 True 849 mRNA 0.53 6 12517368 12528915

Neighbor

gene id symbol gene type direction distance location
AMCG00012182 NA coding upstream 63691 12449711 ~ 12453677 (+)
AMCG00012181 NA coding upstream 114164 12398604 ~ 12403204 (+)
AMCG00012178 NA coding upstream 269403 12245815 ~ 12247965 (+)
AMCG00012177 LOC107677883,LOC107563784,LOC107743762,LOC108273672 coding upstream 278557 12226314 ~ 12238811 (+)
AMCG00012172 phkg2,LOC106907820,LOC103155081,LOC107089513,LOC101485765 coding upstream 294363 12217706 ~ 12223005 (+)
AMCG00012189 NA coding downstream 12920 12541835 ~ 12548644 (+)
AMCG00012190 NA coding downstream 37726 12566641 ~ 12569000 (+)
AMCG00012186 NA coding downstream 60015 12588930 ~ 12591372 (+)
AMCG00012198 NA coding downstream 92096 12621011 ~ 12623081 (+)
AMCG00012192 NA coding downstream 122238 12651153 ~ 12654316 (+)
G135007 NA non-coding upstream 154525 12362545 ~ 12362843 (+)
G135005 LOC104962440 non-coding upstream 157051 12359997 ~ 12360317 (+)
G134948 NA non-coding upstream 353172 12163655 ~ 12164196 (+)
G134947 NA non-coding upstream 353805 12163256 ~ 12163563 (+)
G134946 NA non-coding upstream 355070 12161458 ~ 12162298 (+)
G135030 NA non-coding downstream 83250 12612165 ~ 12648613 (+)
G135027 NA non-coding downstream 107784 12636699 ~ 12699876 (+)
G135028 NA non-coding downstream 163753 12692668 ~ 12693815 (+)
G135033 NA non-coding downstream 190947 12719862 ~ 12721164 (+)
G135045 NA non-coding downstream 307337 12836252 ~ 12840315 (+)
G134968 NA other upstream 324960 12191555 ~ 12192408 (+)
G134958 NA other upstream 336048 12181061 ~ 12181320 (+)
G134955 NA other upstream 344566 12172538 ~ 12172802 (+)
G134898 NA other upstream 485878 12030897 ~ 12031490 (+)
AMCG00012152 NA other upstream 646738 11619177 ~ 11870630 (+)
G135026 NA other downstream 37297 12566212 ~ 12716115 (+)
G135025 NA other downstream 85058 12613973 ~ 12648812 (+)
AMCG00012191 NA other downstream 173408 12702323 ~ 12724194 (+)
G135037 NA other downstream 241868 12770783 ~ 12777157 (+)
G135038 NA other downstream 255173 12784088 ~ 12786060 (+)

Expression


Co-expression Network