AMCG00012189


Basic Information

Item Value
gene id AMCG00012189
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12541835 ~ 12548644 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012189
CTGCAGAATACACACATCTTTTTCATTCTGTGTTCCGTAGTGTGCTGTGCAGTCGCCACTGGCCTCACCAGAAAGTACTACTATATGAATTCTATGAAGTCCTGGGCTGAAGCCCAAAGCCACTGTAGAAATGTCTACACTGATCTGGCCACCATGGAGATTGAATCATCTACAGAGCAGCTTTTAGCGGCAACAGGCAACCTGATCCACACACCTGGCTGGGTGGGACTGTACAGTGTGGACAGTCAGAATTGGCAGTGGTCCAGTGGAGAGCAAGTCATCAACTACAACTGGAGAAGAAACCTGTTCTGTGCCACTGTCAACGCACAGGGAACTTGGGAAGATCAAGTATGCTACGAAAAATCATCGTTCATGTGTTTCACAGGGCTGTTCAATGACCCCTGGGAGTGGTCGGATGGTGCATCATATTCTTTTCGCTACTGGAACTCGCAACAGCCAAACCGATTTAATGAAAATCAGAAATGTGTGGAGATGTATTTTGGGCTGAATGGCCGGTGGAACGATCAGGACTGCAATTTTAAACGGCGCTTTCTCTGCAGCCACGATGCAAATGGTTTGGCTGTTGCTGTTACTGATAGATTCAGGTATTATTTGGAGCAGAAAAGCTGGCCAGAGGCACAAAGCTTTTGTAGATCTCTTGGGGGAGACCTGGCCACTATAAACAACACAGAGGTATTCCAACAGCGTTCACTACTTCAGGATTTTACACCCAATGACACCTGGATTGGCCTGTATCGTGACAAAGAAAAGTGGCAGTGGGTCAATGGAGAGGGACTTAACTACGCCAACTGGCAGACTAAAGGACCCTGTGCTGCAGTTGATTCAGATGGATACTGGATTGATTCAGTCTGTGATGTGGAGCGCCCTTTTGTCTGCTATGAAAGTATGTGGCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012189 True 918 mRNA 0.47 3 12541835 12548644

Neighbor

gene id symbol gene type direction distance location
AMCG00012187 NA coding upstream 12920 12517368 ~ 12528915 (+)
AMCG00012182 NA coding upstream 88158 12449711 ~ 12453677 (+)
AMCG00012181 NA coding upstream 138631 12398604 ~ 12403204 (+)
AMCG00012178 NA coding upstream 293870 12245815 ~ 12247965 (+)
AMCG00012177 LOC107677883,LOC107563784,LOC107743762,LOC108273672 coding upstream 303024 12226314 ~ 12238811 (+)
AMCG00012190 NA coding downstream 17997 12566641 ~ 12569000 (+)
AMCG00012186 NA coding downstream 40286 12588930 ~ 12591372 (+)
AMCG00012198 NA coding downstream 72367 12621011 ~ 12623081 (+)
AMCG00012192 NA coding downstream 102509 12651153 ~ 12654316 (+)
AMCG00012193 NA coding downstream 209377 12758021 ~ 12758746 (+)
G135007 NA non-coding upstream 178992 12362545 ~ 12362843 (+)
G135005 LOC104962440 non-coding upstream 181518 12359997 ~ 12360317 (+)
G134948 NA non-coding upstream 377639 12163655 ~ 12164196 (+)
G134947 NA non-coding upstream 378272 12163256 ~ 12163563 (+)
G134946 NA non-coding upstream 379537 12161458 ~ 12162298 (+)
G135030 NA non-coding downstream 63521 12612165 ~ 12648613 (+)
G135027 NA non-coding downstream 88055 12636699 ~ 12699876 (+)
G135028 NA non-coding downstream 144024 12692668 ~ 12693815 (+)
G135033 NA non-coding downstream 171218 12719862 ~ 12721164 (+)
G135045 NA non-coding downstream 287608 12836252 ~ 12840315 (+)
G134968 NA other upstream 349427 12191555 ~ 12192408 (+)
G134958 NA other upstream 360515 12181061 ~ 12181320 (+)
G134955 NA other upstream 369033 12172538 ~ 12172802 (+)
G134898 NA other upstream 510345 12030897 ~ 12031490 (+)
AMCG00012152 NA other upstream 671205 11619177 ~ 11870630 (+)
G135026 NA other downstream 17568 12566212 ~ 12716115 (+)
G135025 NA other downstream 65329 12613973 ~ 12648812 (+)
AMCG00012191 NA other downstream 153679 12702323 ~ 12724194 (+)
G135037 NA other downstream 222139 12770783 ~ 12777157 (+)
G135038 NA other downstream 235444 12784088 ~ 12786060 (+)

Expression


Co-expression Network