AMCG00012190


Basic Information

Item Value
gene id AMCG00012190
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12566641 ~ 12569000 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012190
GAGAGGGAGATTCAGGCCAACTGTGTGCTATTTGTCTCTCCAGACAGATTTGAGGTTCTTGGTCCACGTTACCCCATTGCTGTTTACCCTGGAGAAGACGCTGTTCTGCCCTGTTACCTCTCACCCAACATCAGCGCTGAGGGCCTGGAGATCAGGTGGTTCAGAGAGGATTACACAGTCCTTGTCTGTTTATATCAGTTTGGACAGTATAACTTTCAAAAGCAGATCCCATCCATCAACTGTATGGTCCAGTCTGCAGACTCTTATGAAGAGGTTCTTATTGATATGGTTGTCAGAGGAGTGTTGTGCTCCAGTCTCAAACTGATCATCTCAGTACACACTCTGTCACTGACAAAACTCATCAAGCTGTTGTCACTGTTGACAGGCCAGCCCTCAGTGTCCCTCCACTCTGAAGGAGGTCAGACCCGGCTGGAGTGCAGGTCAGAGGGCTGGTACCCTGAGCCTGCAGTGGTCTGGACAGACAGGGACGGACACGATGTCACATCACTGTCCAGGACACGACTAGAGAGAGACAGTCAGGAGTGTCTCACTGTCAGCAGCTCCATCCCAGTCAGACAGGAGTCCAATGTCTTCACCTGCCTTTTTAGAATAGGGATCAGGCCAGTGTCTGAGGAGCGGAGTGTCAGTTCCTGTGTCTTAATGCTGCTGTTCTGTTCTCCAGGGGATTTCTTCCCTGACCCCTGTGGGTGGATGGTGTCTTTATTCCTAATGGCCGCTCTCACTGTGGCAGTAGCTGCTCTTCTGCTGATCCAGTGGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012190 True 780 mRNA 0.51 3 12566641 12569000

Neighbor

gene id symbol gene type direction distance location
AMCG00012189 NA coding upstream 17997 12541835 ~ 12548644 (+)
AMCG00012187 NA coding upstream 37726 12517368 ~ 12528915 (+)
AMCG00012182 NA coding upstream 112964 12449711 ~ 12453677 (+)
AMCG00012181 NA coding upstream 163437 12398604 ~ 12403204 (+)
AMCG00012178 NA coding upstream 318676 12245815 ~ 12247965 (+)
AMCG00012186 NA coding downstream 19930 12588930 ~ 12591372 (+)
AMCG00012198 NA coding downstream 52011 12621011 ~ 12623081 (+)
AMCG00012192 NA coding downstream 82153 12651153 ~ 12654316 (+)
AMCG00012193 NA coding downstream 189021 12758021 ~ 12758746 (+)
AMCG00012194 NA coding downstream 193624 12762624 ~ 12763676 (+)
G135007 NA non-coding upstream 203798 12362545 ~ 12362843 (+)
G135005 LOC104962440 non-coding upstream 206324 12359997 ~ 12360317 (+)
G134948 NA non-coding upstream 402445 12163655 ~ 12164196 (+)
G134947 NA non-coding upstream 403078 12163256 ~ 12163563 (+)
G134946 NA non-coding upstream 404343 12161458 ~ 12162298 (+)
G135030 NA non-coding downstream 43165 12612165 ~ 12648613 (+)
G135027 NA non-coding downstream 67699 12636699 ~ 12699876 (+)
G135028 NA non-coding downstream 123668 12692668 ~ 12693815 (+)
G135033 NA non-coding downstream 150862 12719862 ~ 12721164 (+)
G135045 NA non-coding downstream 267252 12836252 ~ 12840315 (+)
G134968 NA other upstream 374233 12191555 ~ 12192408 (+)
G134958 NA other upstream 385321 12181061 ~ 12181320 (+)
G134955 NA other upstream 393839 12172538 ~ 12172802 (+)
G134898 NA other upstream 535151 12030897 ~ 12031490 (+)
AMCG00012152 NA other upstream 696011 11619177 ~ 11870630 (+)
G135025 NA other downstream 44973 12613973 ~ 12648812 (+)
AMCG00012191 NA other downstream 133323 12702323 ~ 12724194 (+)
G135037 NA other downstream 201783 12770783 ~ 12777157 (+)
G135038 NA other downstream 215088 12784088 ~ 12786060 (+)
G135070 NA other downstream 399377 12968377 ~ 12974053 (+)

Expression


Co-expression Network