Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012196 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 12637093 ~ 12700730 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012196 | True | 618 | mRNA | 0.53 | 2 | 12699610 | 12700730 |
| TU169719 | False | 205 | lncRNA | 0.54 | 2 | 12637093 | 12700556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012185 | NA | coding | downstream | 132588 | 12483528 ~ 12504505 (-) |
| AMCG00012184 | NA | coding | downstream | 196621 | 12434496 ~ 12440472 (-) |
| AMCG00012183 | NA | coding | downstream | 213750 | 12403992 ~ 12423343 (-) |
| AMCG00012179 | NA | coding | downstream | 296675 | 12318901 ~ 12340418 (-) |
| AMCG00012180 | NA | coding | downstream | 357851 | 12268225 ~ 12279242 (-) |
| AMCG00012195 | NA | coding | upstream | 20507 | 12721237 ~ 12756347 (-) |
| AMCG00012201 | NA | coding | upstream | 106232 | 12806962 ~ 12825753 (-) |
| AMCG00012202 | NA | coding | upstream | 159031 | 12859761 ~ 12886799 (-) |
| AMCG00012205 | NA | coding | upstream | 202527 | 12903257 ~ 12923677 (-) |
| AMCG00012204 | NA | coding | upstream | 229057 | 12929787 ~ 12938820 (-) |
| G135151 | NA | non-coding | downstream | 5034 | 12578865 ~ 12632059 (-) |
| G135148 | NA | non-coding | downstream | 47286 | 12566673 ~ 12589807 (-) |
| G135008 | NA | non-coding | downstream | 274253 | 12362535 ~ 12362840 (-) |
| G135002 | NA | non-coding | downstream | 370267 | 12266603 ~ 12266826 (-) |
| G134936 | NA | non-coding | downstream | 518501 | 12118340 ~ 12118592 (-) |
| G135160 | NA | non-coding | upstream | 92218 | 12792948 ~ 12840313 (-) |
| G135161 | NA | non-coding | upstream | 163130 | 12863860 ~ 12952125 (-) |
| G135184 | NA | non-coding | upstream | 449785 | 13150515 ~ 13214542 (-) |
| G135193 | NA | non-coding | upstream | 570082 | 13270812 ~ 13279294 (-) |
| G135202 | NA | non-coding | upstream | 621001 | 13321731 ~ 13329044 (-) |
| G134981 | NA | other | downstream | 413908 | 12221205 ~ 12223185 (-) |
| AMCG00012174 | NA | other | downstream | 423294 | 12190015 ~ 12213799 (-) |
| AMCG00012170 | NA | other | downstream | 514368 | 12109540 ~ 12122725 (-) |
| AMCG00012171 | NA | other | downstream | 529679 | 12074004 ~ 12107414 (-) |
| G134803 | NA | other | downstream | 1250114 | 11330466 ~ 11386979 (-) |
| G135152 | NA | other | upstream | 1720 | 12702450 ~ 12703485 (-) |
| AMCG00012197 | znf646,LOC107563786,LOC107727719,LOC107665149,LOC107549872,LOC102077593 | other | upstream | 63842 | 12764572 ~ 12802068 (-) |
| G135164 | NA | other | upstream | 194438 | 12895168 ~ 12911887 (-) |
| G135172 | NA | other | upstream | 381491 | 13082221 ~ 13101480 (-) |
| AMCG00012222 | NA | other | upstream | 530892 | 13231622 ~ 13232389 (-) |
