Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012203 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 12955005 ~ 12960892 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko00532 | Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012203 | True | 876 | mRNA | 0.52 | 6 | 12955005 | 12960892 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012204 | NA | coding | downstream | 16185 | 12929787 ~ 12938820 (-) |
| AMCG00012205 | NA | coding | downstream | 31328 | 12903257 ~ 12923677 (-) |
| AMCG00012202 | NA | coding | downstream | 68206 | 12859761 ~ 12886799 (-) |
| AMCG00012201 | NA | coding | downstream | 129252 | 12806962 ~ 12825753 (-) |
| AMCG00012195 | NA | coding | downstream | 198658 | 12721237 ~ 12756347 (-) |
| AMCG00012208 | NA | coding | upstream | 21437 | 12982329 ~ 12992699 (-) |
| AMCG00012215 | NA | coding | upstream | 121531 | 13082423 ~ 13084065 (-) |
| AMCG00012216 | NA | coding | upstream | 127081 | 13087973 ~ 13101374 (-) |
| AMCG00012214 | NA | coding | upstream | 174851 | 13135743 ~ 13143480 (-) |
| AMCG00012221 | NA | coding | upstream | 194805 | 13155697 ~ 13162263 (-) |
| G135161 | NA | non-coding | downstream | 2880 | 12863860 ~ 12952125 (-) |
| G135160 | NA | non-coding | downstream | 114692 | 12792948 ~ 12840313 (-) |
| G135151 | NA | non-coding | downstream | 322946 | 12578865 ~ 12632059 (-) |
| G135148 | NA | non-coding | downstream | 365198 | 12566673 ~ 12589807 (-) |
| G135008 | NA | non-coding | downstream | 592165 | 12362535 ~ 12362840 (-) |
| G135184 | NA | non-coding | upstream | 189623 | 13150515 ~ 13214542 (-) |
| G135193 | NA | non-coding | upstream | 309920 | 13270812 ~ 13279294 (-) |
| G135202 | NA | non-coding | upstream | 360839 | 13321731 ~ 13329044 (-) |
| G135217 | NA | non-coding | upstream | 456513 | 13417405 ~ 13418804 (-) |
| G135333 | NA | non-coding | upstream | 791018 | 13751910 ~ 13818084 (-) |
| G135164 | NA | other | downstream | 43118 | 12895168 ~ 12911887 (-) |
| AMCG00012197 | znf646,LOC107563786,LOC107727719,LOC107665149,LOC107549872,LOC102077593 | other | downstream | 152937 | 12764572 ~ 12802068 (-) |
| G135152 | NA | other | downstream | 251520 | 12702450 ~ 12703485 (-) |
| AMCG00012196 | NA | other | downstream | 254275 | 12637093 ~ 12700730 (-) |
| G134981 | NA | other | downstream | 731820 | 12221205 ~ 12223185 (-) |
| G135172 | NA | other | upstream | 121329 | 13082221 ~ 13101480 (-) |
| AMCG00012222 | NA | other | upstream | 270730 | 13231622 ~ 13232389 (-) |
| AMCG00012226 | cd2bp2 | other | upstream | 335527 | 13296419 ~ 13300421 (-) |
| AMCG00012233 | NA | other | upstream | 558774 | 13519666 ~ 13524815 (-) |
| AMCG00012238 | NA | other | upstream | 649594 | 13610486 ~ 13667607 (-) |
