AMCG00012212


Basic Information

Item Value
gene id AMCG00012212
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13166600 ~ 13182830 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012212
ATGATGGAGAAGGAAAGACTGAGTAAAACTGGAGAGACCCAGAGCCTGCAGAAAAAGACAACCAGGAAACTGAATGTAACCAGGAGGCAAGTGGCGAGCCCTAGTGGTGGAACTCCCCAATCGCGATCTAGCGAATCAGACAGCCTAGTGATAGTACAGATTGTGTCATCAAGGTCCTGGGAGGAGCTGCTCTCCTGGCTGCAATGGTCCAGCGGAGAGCCAGCCAGCTACTACAACTGGAGGAGGGACCTGTTCTGTACCAGGATGCTGCAGGATGGAACCTGGGATGATCAATGTTGTTTCAATGCCAACCCCTTCATGTGCTACACAGGGCTGTTCAACGAGCCTTGGAAGTGGTCTGATGGGGGAAACTCAACCTTTCGAAACTGGAAAGAGGATCAGCCTGACAACTACCAGAGGGCAGAGAAGTGTGTGGAGCTGAGTTTACAGACTACAGCGAGGGGCAAGTGGAATGACCAGCAATGTAATGTTGAACAACCTTTCTTCTGCTACAAGGACAAATTAATCGTGGTGAAGGAGAACAAGACATGGGAGGAGGCTCTGGACCACTGCCATTCTCACTACACTGATCTCACCAGCATCATCTCAGAGAAGGAGCACAACCTCACAGCGCTGACCCAAAACGCTCAGACTTCCCACGTTTGGCTGGGCCTGAGGCAGAGCCGCCTGTTCGGGTTCTGGTTCTGGGTGATCGAGGACCCCTTGACCTACACAAACTGGATGCAGGGGGAGCCCGAGCTTCAGTCCAGTTCCAGCCACTGTGGAGCCATGTCCACCGCTGACCACCGCTGGACCGACAGACCCTGTGAGGAGAAACTCCAGTTCATCTGCTACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012212 True 858 mRNA 0.53 6 13166600 13182830

Neighbor

gene id symbol gene type direction distance location
AMCG00012213 NA coding upstream 18026 13144427 ~ 13148574 (+)
AMCG00012211 NA coding upstream 34638 13127168 ~ 13131962 (+)
AMCG00012210 NA coding upstream 44594 13120013 ~ 13122006 (+)
AMCG00012209 NA coding upstream 86082 13080189 ~ 13080518 (+)
AMCG00012207 NA coding upstream 92586 13069204 ~ 13074014 (+)
AMCG00012218 NA coding downstream 4552 13187382 ~ 13202392 (+)
AMCG00012223 NA coding downstream 120226 13303056 ~ 13307523 (+)
AMCG00012224 mylpf,LOC108249004,LOC108443170 coding downstream 135085 13317915 ~ 13323389 (+)
AMCG00012227 NA coding downstream 342854 13525684 ~ 13527970 (+)
AMCG00012236 NA coding downstream 358323 13541153 ~ 13543947 (+)
G135073 NA non-coding upstream 180458 12985507 ~ 12986142 (+)
G135072 NA non-coding upstream 181506 12984445 ~ 12985094 (+)
G135053 NA non-coding upstream 265007 12889770 ~ 12901593 (+)
G135055 NA non-coding upstream 268844 12897030 ~ 12897756 (+)
G135051 NA non-coding upstream 271019 12873218 ~ 12895581 (+)
G135097 NA non-coding downstream 29844 13212674 ~ 13216360 (+)
G135110 NA non-coding downstream 78929 13261759 ~ 13262054 (+)
G135117 NA non-coding downstream 104836 13287666 ~ 13298200 (+)
G135131 NA non-coding downstream 189773 13372603 ~ 13397636 (+)
G135137 NA non-coding downstream 234575 13417405 ~ 13421051 (+)
G135070 NA other upstream 192547 12968377 ~ 12974053 (+)
G135038 NA other upstream 380540 12784088 ~ 12786060 (+)
G135037 NA other upstream 389443 12770783 ~ 12777157 (+)
AMCG00012191 NA other upstream 442406 12702323 ~ 12724194 (+)
G135025 NA other upstream 517788 12613973 ~ 12648812 (+)
AMCG00012217 NA other downstream 86366 13269196 ~ 13276971 (+)
G135058 NA other downstream 239605 13422435 ~ 13425359 (+)
AMCG00012228 NA other downstream 288271 13471101 ~ 13508799 (+)
G135240 NA other downstream 336591 13519421 ~ 13520494 (+)
G135264 NA other downstream 401440 13584270 ~ 13585916 (+)

Expression


Co-expression Network