AMCG00012213


Basic Information

Item Value
gene id AMCG00012213
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13144427 ~ 13148574 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012213
GAGGGGGTGTGGTTATGATAATCGCGAATTATATATCTTATAATTACGGTCGCCCGACCAATTAGACCCACCTCCACTCTCCGTCGCGTTGCTGCTATGTCCAAGTTTGTCCCGGCCTTTCAAAGCCAGCTGGCTTCGCTCATGTATACTTTGAACAAAGCGACTTTTATCGAAGTGTCGAAACTCGTCCAGGGCAGCTTCGGCTCCCTGGAGGTCGAGATCGGTCGGGTCAAAAACGACAACGAGCGGCTGAAGCGCAGACTGCGGTCCGCGGAGGAGAGGCTGAGGAGGGCGATGCGGGAGGACGAGGAGACGAAAAccgccagcagcagcagcgacgACGACGAGCGAAGTGAGCAGGACAGTCGGGTTACACACGGGGACTCGGACAGACAGCAGCCAGGGGTGACTGGGTCAGCCAGGTCTACCTGCGATGTGGTTGGACAAAGCCCTTTCCTTGATGAAGGCCACTTTGATTTTGAGTGGTGGGCTGATGTGGAGGATGCCCCGGTGCGTGACCCATCCCAGGGATCTGAGAAGCCGTCTGAGCTCAAAAACGACCccagggaagaggaggagcagcagcagcaggtgggGGAAGAGGAGGTGGCTGGGGCAGAGGAGACAGGAAGTGCCGCTGCGGAACAGGAAGTGAGTGACCTGGGCACCCTGAGCTTGTCCGACGTTCAGTCCCTGTGCGTGAAGTTTCCCACGCTGGATGCCGTTGACATTTCGGACGTGTTCCAGTTGCAGTGTCCCCGCTTGTTAGGCCTCGGGAAACTGGACCTGCCTCGTTCTGAGCCCGTCTTCAGCGGGGAGCTTGGGGGGTCCACTCTCAGCTCCCACACCCCAATTGACCCCTGCCTGGAGCTGCCCCCCTCCCTTCAGCGGATCAGGGCAGAACCTGAAGAGTACACCTGCTATCAGTTGCACCTTGTCCCCCCTGCAGAATCTCTGCCAGTCCAGCTCTCGGTGGGAGCCGGCACAGAGAGCCCAGGTAGCAGCCCTGTGGAGAGACCTGAGCAGGGAGTCACCCAGGCTAGACTGTCCACCCCTCCAGACACAGCAGGCCCCAGTCACCCCCTGGAAGGTAGATCCCAAGAGGAGCTGGGTGGGAACAGTAATAGGGGAGGACTGCAGTTCCCTCTGTTGGCTACACATTCACCCCCGGAGCCCTGTGATCCCAGCCCAAGTAGGAAGGACGCTTTACTGCCATGCACCCTGGCGGACATGTCTGGCCAGTCTCTCCAACCCTTCGTGAGTCTGACACGCATCCAGATTCCCAAGAGTGAGCTGATGGTGAGCAAGGAAGAAGAGGCGGATCCATATCCGAACAGGCAGGGTGAGGACGAGAAGAAACCCATCCTGCTCCAATCAAGCGGGACGTTCGTCAAGCTGGCAAGCTTCAAGAGGCACCTGCTGACGCACAGGCCAAAGGCGCCACACCCTTGCCAACACTGCGGCAAGCGCTTCGTGAAGCTAGCGAGTCTCAAAGCCCATCAGTGCGTCCACGACAGACCAGgccctggcacacacacaccagcttCCCAGGGAACCCCAAAATGTTCAGAAGAACCGGGGAAGATGGACACCCGTGGCTCGGAAACAGAGCAGATGGTGCACTGCCCCGGGAATCTCGGGGGAAATTCTTTGGAGACTTTGGAAGATAATTATGCCGGAGAATCTGTACAGAAGAGAGAGGAGGGCAGCTGCACGGAGCTGGGAAAGGAACTGCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012213 True 1740 mRNA 0.59 4 13144427 13148574

Neighbor

gene id symbol gene type direction distance location
AMCG00012211 NA coding upstream 12465 13127168 ~ 13131962 (+)
AMCG00012210 NA coding upstream 22421 13120013 ~ 13122006 (+)
AMCG00012209 NA coding upstream 63909 13080189 ~ 13080518 (+)
AMCG00012207 NA coding upstream 70413 13069204 ~ 13074014 (+)
AMCG00012206 NA coding upstream 79052 13033108 ~ 13065375 (+)
AMCG00012212 NA coding downstream 18026 13166600 ~ 13182830 (+)
AMCG00012218 NA coding downstream 38808 13187382 ~ 13202392 (+)
AMCG00012223 NA coding downstream 154482 13303056 ~ 13307523 (+)
AMCG00012224 mylpf,LOC108249004,LOC108443170 coding downstream 169341 13317915 ~ 13323389 (+)
AMCG00012227 NA coding downstream 377110 13525684 ~ 13527970 (+)
G135073 NA non-coding upstream 158285 12985507 ~ 12986142 (+)
G135072 NA non-coding upstream 159333 12984445 ~ 12985094 (+)
G135053 NA non-coding upstream 242834 12889770 ~ 12901593 (+)
G135055 NA non-coding upstream 246671 12897030 ~ 12897756 (+)
G135051 NA non-coding upstream 248846 12873218 ~ 12895581 (+)
G135097 NA non-coding downstream 64100 13212674 ~ 13216360 (+)
G135110 NA non-coding downstream 113185 13261759 ~ 13262054 (+)
G135117 NA non-coding downstream 139092 13287666 ~ 13298200 (+)
G135131 NA non-coding downstream 224029 13372603 ~ 13397636 (+)
G135137 NA non-coding downstream 268831 13417405 ~ 13421051 (+)
G135070 NA other upstream 170374 12968377 ~ 12974053 (+)
G135038 NA other upstream 358367 12784088 ~ 12786060 (+)
G135037 NA other upstream 367270 12770783 ~ 12777157 (+)
AMCG00012191 NA other upstream 420233 12702323 ~ 12724194 (+)
G135025 NA other upstream 495615 12613973 ~ 12648812 (+)
AMCG00012217 NA other downstream 120622 13269196 ~ 13276971 (+)
G135058 NA other downstream 273861 13422435 ~ 13425359 (+)
AMCG00012228 NA other downstream 322527 13471101 ~ 13508799 (+)
G135240 NA other downstream 370847 13519421 ~ 13520494 (+)
G135264 NA other downstream 435696 13584270 ~ 13585916 (+)

Expression


Co-expression Network