AMCG00012214


Basic Information

Item Value
gene id AMCG00012214
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13135743 ~ 13143480 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012214
ATGAGCGGGGCGCTGTACATCTCCTTTTTCCAGGGCCAGCTGGAGTCCGTGATGGAGCGGGTGGTGGAGTTCGCCGTGCAGGAGATCACCAGCAGCGTGGGCGAGAGCCTCACCGCCTTCCTGGTGGAGATCGCCGCCAAGGAGCAGGAGAACCTCCGCCTgcggctggggctggggctggggctggcgCCCGGGCTGCAGCCCTGCGCCGCCGCCGTCGGGGGCAAAACCAAGAGCCCCGGCGGGACGGCGACCAGCTGCCCGCCCAAGCGAGCCAGCAGCCCGGGCCACGGCAGCGACGCAGGCCGAGAGGCGCACGGAGAGCGGATGCAGGCGAGCAGACAGACGCAGAAGGGACGGATTGTAGGCCAGCTGCAGGCTGTCCTGGATCATGTCCTGAAATTCGCTGTGACGGAGTTGACCAAGATCGTGGAGCACAGTTTTGATGACTTGTTGACTGAGATGGTTGCAAAGGAGGAAGAGAACAGGATCCTGAAGCTCAGGCTGCAGCTGCGCAGGCAGGAACAGCAGGACAATGGTGTCCCAGAAAACACGGGGTTAAAGACTGCGGAGACGCTGCCCAAGTCTCCCAGTAACTCAAGCCCTGGCAACAACGGGGACGTACAGCCGCATTCCCAGAATGCTCCGGACCCTGCACAGAGCGAGAATTCGCCGACAGGACAGAGCAATCCACCCACAGATGAGAAGCAGTCCGTTCTTGCAGTGGCTCAGGACTGGGTTCCCATCCTTGACAAGGTGTTTGGTCAGAAGTGGTGCAGTGACCTGTGGCAGATCCAGGAGCTGGCCTCTGCAGACGAGGAGGCCAGAGTGGCCAGCCTGGAGAATTTCCTCCGGGCCAACCCAGAGTCCCCGGAGGAAAGGGAAGGCAGCCAGCCAGAGGAACCTGCTCCAGACAGGAGCTTCAGGCCGCAATGGCTGCAAGAGGAGCGGGCAGAGGCCTACATGCTCAGAAGAGACCAACAAGGACGACCAGGGAGTAACACCACAAacgactCCTGTGGTTCCTCTGCTTCTCCGGCCCGTACCCCCAGTGGTGCTGAACCCTCCCGGCAGACCAACGGAGAGCTGCAGACCTCAGCCTCAGACCCGGAGCCCCTGACGGGTCCCTCCATGCTGCACAGACTCCTGACCCTGCCCACCACTGGGCTCACCCAGTCCCACCCTGCCGATGCCCCCCATGAGGACCTGGAGCGCAGTCCCCGCCCGCAGCCGGACTGCAACCAGAACTTCCTCAAAGTAGAAACAGAGGAGGTGGGCGGCGAGCTGGGAGAAGAACCAGGCCCAGCTGCATCCCCCTGCTCGCCTGCAGTGCAGAGGAGCTACCGGTGCACCCAGTGCGGGAAGAGGTTCCGCCGGCTGCCCCTGCTTAGGGCCCACTCTGACTCGCATGCGCAGTCCCCTGCTCCGGCAGCAGAGGGCCCATTCCACTGCGGCTCCTGTGGGAAGAGCTTCCTGCAGTCTGCCTGCCTGCAGTCCCACCAGCAGGTCCACACTGTAGGGAAGAAGCCCTGAagcccaacccccacccccacatacAATCCCACTCGCTCGGTTTGCTCGCAGACTCACCAGAGTCCCTTACATAGGGATTTTGACAACCCTCCTGAGGGTGCCATTCCCCTCGGGGTTGTGGCTTTTGTGGACCCAGGGGACTTGTCACGGAACAAGGTTGAAAGTCGCCCCAGTGTGTAGGTTGGGGGTGCCGGAAGGATTATTGTCGTGCTCTGGGCGAGGATGTAGTGCAGTGGTTCACAACCCTGGTGCTGGcgggatggggggtgggggacatCTTGGTGATCATACATTCATTGCTCACCAGCGCTGCTTCTCAGGAGCTCAGAGGGTTCAGGCTGTCAGCAGCTGCAAACTGCATGGCATCTTacatctcctcctccttctgACTGGCCAAACTGCAGCTACACTGTGGACTGTGGGCTCTGTGGGCTTCTCAGTCTGAAAAATAGTGGGTGACTCATTCCCCTTACAAATTCCCcaccaaaataatattaacaaaacaaacgtttatgtattttttttcatatatatataatttcatatatatttataatttcaatatatattgcTGTCTAACAGGAACTGCGCATCTCTTTAATTTTACGTGTAAGGCCCCTCCATTCCTTTTAAGTTGAAGCAGGTGCTTTGTGAAATCCAGGCTTGTCTCAGAGCACCTTGGGGACTGTGGGACTAGATGGTAACATACGCACTTCTAGCACCCAGCCTTCATGAGCCTTGTTTTTCCGAAGGGCATTTTGAGGTGATGGCCTTGCTGTGGGCCAAAGCCTGATGGGAATAGGTACTAAACTTATGTGCGTGGGGAGCGATCTCGGAAGCTCGTTTCTGTAGGTTGAAAGTGCACCGTATCTCTAGTTCCCCGCTTGGGTTTTCTGCCGCCACTGGGTTCCACTCCCAGCTGAGTGGGACTGTGTGTTGAGCTGGACTTCCATCAGTGTTGCCTGACACACTGCCCTGCACAACATCCCCATACTGTACTGGCTGGTTGTGGTCCCAGCACTAACAAGGGAACAGTGAGACGAAAGGCTTTGTACAGCCACCACCCCCCCATTACACATGCACGTTTGGACAGCACTTAATAAGATTCCCTAATTGCTAATTGATATCATATCACCATCcacaagtctttttttaatcaagataCATGAGAGGGGAGTAGATGAACATGCATAAAAACACTGACAAAGAGAAGCCCTacatgaggggaaaaaacagcaaTGTACAGTACTGATCAAGACAAAAGACctgctgtgtttaaaaatggCTAATCTCACAGTAGAAATGAGCTCCTGATTTCCCTCGCTTCTCTTTTTATACTTGTTTTTGTCTGTCCTTTTGTACAGCTCGTTGGATTTTTGTTTACGTACAGCACTCGACGGATTTCACAGTCATTTCTGTGCTAAGATATCTACCTGTATGTTTTACAtaagacaaagaaaacaaactatttaattgtaaccttgaataataaataaattaaaagggcATGGGACATTCAGTTCCCACGGCAATCAAGTTATGATGGAATTTGTCAGTCTGTCtttttttcagagaaatgtATGGCAATGGCGCTGACGCAGTTGATGACTCATTGAccccagtttattttttacttaagcTAAATTTAAAGACCCCACCCTCATTAAAATCTAGCCGAAAAATTATAATGGCATCAGTGTGGTTTCTGTTACGCATCCACATTGTTTCCCCCTGTTAGATCTGCACATATAGAAGCTtgcaaaaattatattaatgagCCAATTTTCTTTTGGTAGGGGAAAATGCTCTTTGTTCATCTGCACAGAGAAATTGTTAGCAATTTTGGCTTTGCACAAGGTCAAGGAATAAACCTTGGACTCATTGAAATGAAAACCGGATAGCATTGTGTACTGAATTTAGCATATCTCCCAACATTGTATTAATAACCAAATAatctaccaataataataatctcttaTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012214 True 3515 mRNA 0.52 4 13135743 13143480

Neighbor

gene id symbol gene type direction distance location
AMCG00012216 NA coding downstream 34369 13087973 ~ 13101374 (-)
AMCG00012215 NA coding downstream 51678 13082423 ~ 13084065 (-)
AMCG00012208 NA coding downstream 143044 12982329 ~ 12992699 (-)
AMCG00012203 NA coding downstream 174851 12955005 ~ 12960892 (-)
AMCG00012204 NA coding downstream 196923 12929787 ~ 12938820 (-)
AMCG00012221 NA coding upstream 12217 13155697 ~ 13162263 (-)
AMCG00012219 NA coding upstream 64611 13208091 ~ 13222556 (-)
AMCG00012220 NA coding upstream 115930 13259410 ~ 13266847 (-)
AMCG00012225 NA coding upstream 137616 13281096 ~ 13291869 (-)
AMCG00012232 NA coding upstream 321992 13465472 ~ 13486579 (-)
G135161 NA non-coding downstream 183618 12863860 ~ 12952125 (-)
G135160 NA non-coding downstream 295430 12792948 ~ 12840313 (-)
G135151 NA non-coding downstream 503684 12578865 ~ 12632059 (-)
G135148 NA non-coding downstream 545936 12566673 ~ 12589807 (-)
G135008 NA non-coding downstream 772903 12362535 ~ 12362840 (-)
G135184 NA non-coding upstream 7035 13150515 ~ 13214542 (-)
G135193 NA non-coding upstream 127332 13270812 ~ 13279294 (-)
G135202 NA non-coding upstream 178251 13321731 ~ 13329044 (-)
G135217 NA non-coding upstream 273925 13417405 ~ 13418804 (-)
G135333 NA non-coding upstream 608430 13751910 ~ 13818084 (-)
G135172 NA other downstream 34263 13082221 ~ 13101480 (-)
G135164 NA other downstream 223856 12895168 ~ 12911887 (-)
AMCG00012197 znf646,LOC107563786,LOC107727719,LOC107665149,LOC107549872,LOC102077593 other downstream 333675 12764572 ~ 12802068 (-)
G135152 NA other downstream 432258 12702450 ~ 12703485 (-)
AMCG00012196 NA other downstream 435013 12637093 ~ 12700730 (-)
AMCG00012222 NA other upstream 88142 13231622 ~ 13232389 (-)
AMCG00012226 cd2bp2 other upstream 152939 13296419 ~ 13300421 (-)
AMCG00012233 NA other upstream 376186 13519666 ~ 13524815 (-)
AMCG00012238 NA other upstream 467006 13610486 ~ 13667607 (-)
G135318 LOC100846954 other upstream 561366 13704846 ~ 13705612 (-)

Expression


Co-expression Network