AMCG00012219


Basic Information

Item Value
gene id AMCG00012219
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13208091 ~ 13222556 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012219
ATGAATAAGCATTACAGAGCGTACCTGCGTGCCACGCATGCCCGCCTCCTCCGTGCTCCGGCCGGGGACGGTCCCGCTGCCCCCCACGTCACGCAGGCTGACTCGGCAGTGCGCGCCGCCGCGCTGAGCAGTGAGACCCACCTGATCCTACAGCACCGACACACACGACCCAGTCCTGCTCTGCTGTCCCGCACTGGGTCTTGGGTCGGCGGTTGCGACGGCGCTGTTGTGGATCCAGGTCCTCGTCTGCCCGGCTGGGAAGCGCCGCTGGCCGCAGAGGAGCAGCTGGAGGATGGCGGGAACCAGGGACCACCGCAGAAGAGCAGGCCTGTTAAAACACCTCAAGATCCACTAAACATTGCCCGTCTCCGGGGAGGAAGGAGCCGCAGAGCCGCCCAGTACAAGACAAAAGATTCTCCCTGGCTCCAGCTGCTCCCAACTTGGATGTCTTGACTTCTCTTCCACAACCCCCTTCCTGGGTGGCTGCGTTCTGGGGCTCGCTGGTGTTGTGTTGAAAGAAGCAGAACTGCAATGGAATGCCTCCCATCCAAGAGCAGCGCTGAGCAGATAAACCACAGAGCTGTGGATATCTCATCCTGTAGCAAGCTCCAGCACGCAGGCAGGGTAGGAGAGGCCTGGGTGGGGTGGGTTTGATTTAGCCTGTGTGGCAGCGAggcttcggtttcagtttcatctAGATTTGGCTCCATTCCCAATTCAGAGTTTGGTCAAGGAGGATTTCTAATGATGGCCCAGCTAGGGTACCACCGTGGCGGCCTGGCCGGTGCCAACGAGATCTACCTCACTGAGGATGGCTCGTACGTCCCTGTTAAAGGGGACCTGGACCCGGAGCCCTCCCCTCCCCGTGATGACCTGGTCCCCAGTCCACCAGTTGACCAGTCCCAGACAGAAGCACAGCAGAGGGGGACGCCTGAAGACTGGGATAGCATGCCCGGGGGACAGAAGcggaagagagaggggaggggagacgAGGAGGAGTTGGGGATGGATCTCTATGACAATGCTGGGCCCAAGACTGAGCGAAGGTGGGGTCAGACCAAAGCCCCCGCCATGCCCCCCCGACAGTCAGTGCGCATCGGAGTCTGCAGGACCAGAGAGGACCCCTCCCACCACGAGGGGCCAGGGTCTGAGGTGGACCTGGGTGGCAGTGGGCAACAGGAGGGGGAGTCTGTCATTGTGAAGACAGTGTGCGAGCAGTGCCAGGAGTTTCTCAGAGACTGCTGTGAAGTCCACGGCTCTGCGGTGGTCCTCAGGAACAGCCCAGTCCAGGAGGGGGATCCGCAGCATGCCAGACTCACTCTACCCCCAGGCCTGGCTGTGAGGCCCTCGGGGAGTCCTGGGGCTGGGCTGGGGGTGTGGACCCAGGACAGGCTCATCCCCACAGGGGTGCACTTTGGACCCTTTGAGGGGGAGACAGTGGGCAAGGAGGAGGCCATGGAAAGTTCTTACTCCTGGGTGATACAGAAGGAGAGCGGGCAGCAGGAGTTCGTCGATGGGCAGAGGGAGGAGCACTCCAACTGGATGAGGTTTGTGAGGTGTGCCAGGTGGGAAGAAGAGCAGAACCTGGTGGCCTTCCAGTCTTGGGATGGGGTCTTCTTCCGCTCCTGCAGGCCCATACCACCTGGCCAGGAGCTGCGGGTATGGTATGCAGACGACTACGCTGTAGGGCTTGGCGCCACCTGGGACTGCATCTGGGACAGGAAGTGCCATCCAGCAGCAGATGGCAGTGAGGAGCAGCCCACTCTTGGCCACCCCTGTCCCAGCTGCCCCTTCTCCTTCCCGGCTAAGGTCTACCTCCGGAAGCACTTGCAACGAACTCACCCCCAAGACTGTGGAGGGCTACAGGGTTGTGTCTCTGAGGGGGACGGGGAGACTCTTTCTTCTGGGCAGTGTGGACAACAGCGCTCTGGATCCCCTggcccccctcctcctccttcacagACTCCAAGGGTGAACAGCACAGCACGAGAGCCGTCCCCAGGAGACTCCCAGTGCTGTACCCTGTGTGGGAAGAGGTTCGGGGGGCCAGCGGATATGCAGGCCATGCCGGAGGACTCTGACGGCGGGCACTGCTGTGCTCACTGTGGGGAGAGCTTTGCCCAGTTGGCAGAACTCAAGAAGCACAAGAGGAGCCACGTCGGGGAGAAGCTGTATGGCTGCGGCGAGTGCGGCAAGAGCTTCAGCCGCTCAGAGAACCTGCGGGTGCACCAGCGCATCCACACGGGCGAGAAGGCCTACCGCTGTGGGGAGTGCGGCCGAGGCTTCAGCCAGTCAGGCTCCCTGACTCGGCACCAGCGCATCCACACGGGGGAGCGGCCGTACTCCTGCGCCCAGTGCGGCAAGGGGTTCAGCCACTCGGGGGCCCTCACCACCCACCAGCGCATCCACACCGGGGAGAGGCCCTACACCTGCCCCCAGTGCGGCAAGAGCTTCAACACGGTGGGCTACCTGCGCACGCATGAGCGCTTCCACAACGGCGACCGTAAGCATGCCTGTGACACCTGCGGCAAGACCTTCGCCCAGGCCCGCGACCTCGCCATGCACCGCCGCACCCACACGGGGGAGACGCCCTACTCCTGCGCTCAGTGCGGCAAGATGTTCAGCTTCCTGGGCGACCTGAAGCGGCACGAGCGCATCCACACAGGGGAGAAGCTGTATGCCTGCCAGGACTGCGGCGGCAGCTTCAGCCGGGCTGGGGACCTGAAGACGCATCGGCGAGTCCACACGGGGGAGCGGCCTTACCGCTGCAGCCTGTGCGGGAAGGGCTTCAGCCAGTCGGGGGACCTGACCAAGCACCTGCGAATCCACACGGGGGAGCGGCCCTACCTGTGCACCCACTGCGGGAAGAGTTTCACTCGCTCGGGGGACTACAAGACACACCAACGCATCCACACGGGAGAGAAGCCCTACTGCTGCCCCCAGTGCGGCAAGAGCTTCCGCGACGTACGCATCCTCAAGACGCATGTGCGCAGCCACTCGGGGGAGAAGCCGTACTCCTGCGACTGCTGCCCCAAGAGCTTCACCCGCCTCTACTACCTGAAGATCCACCAGCAGACGCACACCCAGGCAGGAGAGGCTGGAGAGACTCAGACAGACGCAGCGGAAACTTTGAAGGCAGTGGATGCACTCTGAGTCTGAGGGGGAGTGTTGGTTGTATTCTGTCAccttattcattttattttcactttccgTGAACTACCTCATCGCAGGGGCTGGTGGCACAGACTCAGATTTGCACTGGTACTGTACTacctattgtttttttgtatgtaggGTGGTATTAGACTAATCCAGTGCTAATTTGGAACTATGAAACTAGCTGTTTGAGGTTGGCTGAGCAGTATTTagttgtggggaaaaaagaaaatcttaacACTATCCAATCCGTTTCTTATTGGTGCTGACATTGGGTGTGGTATGATTGCTGTGCCCTGACTTGGGCCTCCGCTTTCTAATGATTCACAGGTAGACTGGCTGCTGTGTGTAGAGGTCTCTAATTCAGTCGCTATATATTGGTCCAGGAGAGGAGTTCTTGTGACATCACTCTATTGACAGGGTTCCCTacccttctggtttttgttccaaccaagctctcaattacttaattgaactaataattccTCAATCAGAGccgtttaattattttaaatggtaggAGTATaatataaagaacttattacaGAACCAACTCTTAtagtacacaatttaaaaagtcaaatctaagcagattgttacttcaattaatggttgaaagaaaaaaaaaaacagcagggtagggggttgTCCAGGACTAGGGTTGGGAAACTAGGCACTGCACCCCATATTAGCCCTGATTCCATTGTATGCAGAGGCAGAGACCAgatggatggacagacagacgggcAGACAGAaaccagacagagagagacaggggtgTGAATTGccttatgatgatgatgatgataatacattaaacattgaCCTTAAGCAAATACATTACACAATTTCCTAAAATTAAGTAACTTGACTGTTCAATGTTAGTGAATTACTGCTCAGTTGACCTTGATGTTGTGGATGTATTATGAGGAGGGGGTGGGAGAGTTTGTCctaaaaaacagagaaatacattGTCCATTTGGTGttagtttattattgtattgagtCATCCTGAGTGGTCATTTTTTATTGCTATGAAAGCTATCTGTGCACtacaccagtggttctcaatcctggtcgtggcagaacactgaccctgctggtttttgttccaactgagctctcaattacttaattgaacccttaattgaagtcatttgATTACATCTGAATCTTTAAACTGTGTatctgataaaaagttggttcctaaATAAGAtgatttccttatacaattttatacttaaatcCTCTActcttcaaaataattaaattgctcTGAATTTGGAAATTACTTCAGGGTCAGGGTCAGTGTTCCGCCacgaccaggattgagaaccactgcagtacactgatgatgatgatgatggcaGCATTCTCACAGGTCTGCATGTGTGTACATTCTCTGTGTGTATCACTATACATCTGACTTACATGAAGTATTGTACATTGGAGGTTGATACCCTTAGTTTGTCTGCAAATAAACCTCATATGGTACCTCGGAGTATTCCAATTATTTCCAGGGCAGTTGTTTTATGAGCTGACGGATCCATGGTACAGACTGACCTTTGTACTCTACTGTACcctactgtgctgtgctgtgctgtgctcaaCAATGGCTTGGAGAAAACAATTCCAGAACCCAGCTGGGCATTGACTCTGCAGGACCGGGGTCTGACAGCACTGGGTTTAAAGACACTGCCTGGAAGTCTCACCTGTTCCCATCTTGGTCTACAAATGCAGGTAAGAGATGACGAGTTGAGAGTCTCTTTATCGGTGTGTCAGAATACCAGTCACGGACTTCCATGCCCCTGGACCACTTCCAGCTCCTCCTCCGCAGCCTCGTCACAATGCTGCTTTGCTTTTTCCTTGCGGACTATGTCGTGGTGGAGTCGAATGGAGCTGCTGGATGATTTCACACGCAAACTTGACGTAGCAGCTCCATAAGATAACGGTCGCCATCTGGTTCTGTTATTCTGCGCTCGGAGAAAGAGCTGCGTCTGGCCCGGGAGTGGATCAGAAACGCCGCCCGGTCCGCACCGGCGCCCCCTGCCGAACCTGGGCCTGGCGACGCCGCCACACCTGACCCCGGAGAGGGAGCCGCAGCCGCGGGAGCTGCCCCTGATGCTGAGGAGCCACTTCCTGTTGGGCAAGAAGTCTCAGACCAGGAGGGGGACGAGCAGCTGCAGTCTGTCACCGTTAAAGAAGAGCCCCCGTTTGTTGACCCTCTCCCCGCCTCTCCTGCCCCTTTTGACTTTCACACTGTTGTCATCAAAGAGGAATTAATAGACCAAGCAGATGACCTGGACTCTGACGGGGCTCCCGACACGGTGGACCCTGTGAGCGGTGCCCCCGTGCAGAAGGAGGCCATGCTTGGGGGTCTGCCATGGGAGGCAGAAAGCACAGGGGCAGCGTCTCCGAGACCTATAGATGAAGTAGCTGCCCAGCCAGCCTTTCACATTAAGAAAGAATCCAGCAGGCGGCTGCTAGTCGTGGGAGAAGGGGACCCAGGTGGAGAAGCCCAGGAGAAGCGAACTGGCAGCAAACTGAAGAGAGTGGACAGTGAAAGAGGGGTACCTGGTGAGAAGACTACATGGGAGGAGCTGGACAGACCTGGGCAGGGAGCCAGTGCAGCAAGCAGATTTGCAGGCGGGCCCAGCAGAGACGGGCTCCGGCAGCAGAGCCCCCAGACCCGCTGCTCCTCGGTGGGGTACAGCCTGCGCAAGAAGCCAAGAGCCAGCTACAAGCTCAAAGAGGCCATGAGTCAAAACGGTGCAGGCGGCATGACGTCGGCAGCCCTTTTTTCTCGCCACCGAGACGAGGATCCCAGGGTCAGACGGCGCAAGGAGGATTTCGACAGGCGGCTGCAGCAGCTCCTGCGGCATAGCGCGGACCACAAATCTGTCCGATCAGTGCTCCCCCGCATCCTGATTACTGCCCTCTCGTCCAGGAGGTGGAGCAGGCGCCAGTCCGCCTCGGAAAGGCCAGTGAGTGGAGCCAGAGTTGGGGCAGGCGTTTCTGGGGTTTGAAGATGAGCGTTACCAAGTGTCTATTCCACAGACGGTCCACTGCTCCCTCGCTTTCTAAAATACTTCCTCCATAAAAGGGGGAGGTGGGGCAAGCTTTTGACATCTTCCTCATTGTGCACCAACTGTCGTGGCCCACGCCAAAATGCCTCACACCGACTTCCCCAAGCATCACCTGCAGCGTCATCCCACTCCACCTCTCCCTCTGTGCGCCTTTGCAGCACCAATTAGGGTCCAATGGAGAATCTGTCTAGAGGAACCCAAAGATTCCGGTTCCTGGGGGACAGTTGGACTTGATTGACATTTGAGACATTATTTCCTCTGCAGTCTCAATGAATaaagctaaatattttatttttttattttgtttaagccACCcaccatccctctctctctcccatttgTCTGTCCCTTATTACCCAATCCAGCAGGGTTCATGGGTCAGCCAACACAATGATCTTATTAATAGCCCTGGAATACTTTATATTGAgtagactgtgtgtgtgcagtaatgTACTACTTCTCCTACTTGCCAGtcttgttctttcttttgtgccttctctcgctctctctccatTTGACTTAAACCCAACTGCTTTATCTCCTGTCTGTCTCACACTTCCCTCTCGTTAATTTCTCTCTGCTTTCTCACTCACAATCCCTTTTGCTGCCTGTCCTCTCTTTCTGTTCCCTGCTCCTCTCTTTTTCTGTTATTCACCTTGACGGCCACCCTTTGTCACTTTCAATAGACTCCCCTCCTCGCCCTGCTCACTTGCACcccattttttctctctcactccctctctcgctttctctctgCACAGATGTGCTCTCTCCATCCTCCTCCTGCCTCCAGTGGCCCGTGTCTGTCCTGGCCCCGATCCAACCCGGTAGTCGCCTCGAGAATTCCGACCCCGCTCCCCAGTCTGGTCCAATGGCATCTGAGCACCCCCAGCCGAGCAGGACTCACCCCATGGCTGTCTCCACAGATGACTGTTGGCCTAGCCACCACTGTGCCCAGTGTGGCAAGAGCTTCAAAACTACTGGGAGACTCCTAGTACACCAGCGTGTGCACACAGGGGAGCGGCCTTACCCCTGTGCCTAGTGTGGGAAAACGTTCTCTCAAGTATCCATGGTCAAACAACACCAGCGAGTGCACACAGGGGAGCGGCCCCACAGCTGAGCCCTTTGTGGCATGTGCTTTGGCCACACGGGGCACCTGTTCAGGCAACCTTCTCATTCATACGGGGCAGCGGCCCTACTAGTGCACTC

Function

GO: NA

KEGG:

id description
K20796 PRDM7_9; [histone H3]-lysine4 N-trimethyltransferase PRDM7/9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012219 True 7451 mRNA 0.55 11 13208091 13222556

Neighbor

gene id symbol gene type direction distance location
AMCG00012221 NA coding downstream 45828 13155697 ~ 13162263 (-)
AMCG00012214 NA coding downstream 64611 13135743 ~ 13143480 (-)
AMCG00012216 NA coding downstream 106717 13087973 ~ 13101374 (-)
AMCG00012215 NA coding downstream 124026 13082423 ~ 13084065 (-)
AMCG00012208 NA coding downstream 215392 12982329 ~ 12992699 (-)
AMCG00012220 NA coding upstream 36854 13259410 ~ 13266847 (-)
AMCG00012225 NA coding upstream 58540 13281096 ~ 13291869 (-)
AMCG00012232 NA coding upstream 242916 13465472 ~ 13486579 (-)
AMCG00012230 NA coding upstream 273931 13496487 ~ 13506591 (-)
AMCG00012234 NA coding upstream 287659 13510215 ~ 13518859 (-)
G135161 NA non-coding downstream 255966 12863860 ~ 12952125 (-)
G135160 NA non-coding downstream 367778 12792948 ~ 12840313 (-)
G135151 NA non-coding downstream 576032 12578865 ~ 12632059 (-)
G135148 NA non-coding downstream 618284 12566673 ~ 12589807 (-)
G135008 NA non-coding downstream 845251 12362535 ~ 12362840 (-)
G135193 NA non-coding upstream 48256 13270812 ~ 13279294 (-)
G135202 NA non-coding upstream 99175 13321731 ~ 13329044 (-)
G135217 NA non-coding upstream 194849 13417405 ~ 13418804 (-)
G135333 NA non-coding upstream 529354 13751910 ~ 13818084 (-)
G135405 NA non-coding upstream 632002 13854558 ~ 13856288 (-)
G135172 NA other downstream 106611 13082221 ~ 13101480 (-)
G135164 NA other downstream 296204 12895168 ~ 12911887 (-)
AMCG00012197 znf646,LOC107563786,LOC107727719,LOC107665149,LOC107549872,LOC102077593 other downstream 406023 12764572 ~ 12802068 (-)
G135152 NA other downstream 504606 12702450 ~ 12703485 (-)
AMCG00012196 NA other downstream 507361 12637093 ~ 12700730 (-)
AMCG00012222 NA other upstream 9066 13231622 ~ 13232389 (-)
AMCG00012226 cd2bp2 other upstream 73863 13296419 ~ 13300421 (-)
AMCG00012233 NA other upstream 297110 13519666 ~ 13524815 (-)
AMCG00012238 NA other upstream 387930 13610486 ~ 13667607 (-)
G135318 LOC100846954 other upstream 482290 13704846 ~ 13705612 (-)

Expression


Co-expression Network