AMCG00012223


Basic Information

Item Value
gene id AMCG00012223
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13303056 ~ 13307523 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012223
ATGCGCCGTGCGGGCGCCGTCAGACTGCCGCGCAGACACCGGTACAGGTACAGGTACAGctgtgtgtgtattcccCCCCCTCAGCTGTCAGCTCTCGTCATGAAGCTGCATGAGAAGATCCTGGTCCACTACTTGTCCAGCAACTCCCCAGTGGACAAAGAGGGCCACCTCTACAAGAAGggggaGCGCAACACGTCGTACCAGCGGCGGTGGTTCGTGCTGAAGGGGAACATGCTGTTCTACCTGGACCGGCGTGGGGGCGAGCCGCTGGGCGTGATCGTGCTGGAGGGCTGCTCGGTGCAGCTGTGCGAGTCCGAGGAGCAGTTTGCCTTCGCGCTGGTGTTCCCCGGGCCCGGCCTGCGCACCTACAAGCTGGCGGCCGAGGACCAGGCCAATCAGGAGAGCTGGATCAAGGCCCTGCTGGCAGCCAGCCACAGCTTCCTCAGCGTGCTGGTGAATGACCTGGAGAAGCAGTACGAGGATGCCAAGAGAGCAGCTTACTCTGAAGGCAAGTACAAGCGctccactgtgattggctcagaCGCAGAGATGCTCACCGAATCGCTCGTGGATCTGGACATCGTCCCCTTCTCCGCTCCGGCAGTCAGGGAGGGGAGGAGCTACAGCACTAATCACCTACATGCATTGCCCCCTTCCACCAAGCCAGCAAAGAAGTCTCCCAAGTTGTGGCCCAAGAGAAACGCCCATGTCACGCCCCTCAACGAGCCGCTCCCACCCTCAGGAGGCGGGGCCCGGGCTTCACAGGACTGGTTTGCGGTGGGGGCGGAGACGCTGGCAGACTTCAGTGAATTGCACGAACTGTATGGGCGGGAGGTGCGGGAGCTCCAAGCCAATTGGCAACGGAAATGGGCAGGGCAGGGTGGCGATAGGGAGGGGGAGAAACAGGAAGTGGTGTCAGACTTGATTGACTTGGGGTGAAGAAATCGGTGCGGTTCCTTCCTGTCCCATCCTTTtccttgtctctgtctctttctgcaGTGCTAATGTCCTGCAGTGTCCTGTCAGTCAGTCCGTATGTGTCAGTAGTCTATGTAGGACTCCCCTCTTTTCGATCAATCTCTCTCAAGTTCAGCACaaccccacccctctctctgtatCCCTGTACATGTCTGTCgctgtgttttttaataagCTTGCCTGACAGTCACCTCTTTCCTTGATTAACTCAATCCGATTTAAAgccaggggtgtcagactccagtcctggatGGCTGGGGTATCCCCTGGTTTTTGGTCCAGCCCAGCCAtcagctccttaattggtctaattaaattatgaacTGGATGAATTGAACACTCTCCTGAATCTGAAATGCTTGGTGGGGGACAGCATCTGGAGTAATTGACATCGGGTTATCAGCTGTTAAATTGAAATGTGAGTGTTGAGTTCTAcctgagtggggggggggaagccgGACTGTACAAGGGCGGCTGTTTAGAATCTCGGTACACCGATTGCCCCAGTGTGTCCAGACGTGCCCCCAGTACTGATTAATACAGCACCTGCATCAGGAAAGAGCACATATGTGTGACACGTGTGTTACTCTGTGAGTGCCACAGCACCACACATTGACGTGTAACCTGCTGCGTGTACGAGCCTCCTGTCCACGTGACTTCTGTTAATGACACTGGATCAGTCTGTGTGCTGGGTCTCTGGGTTATATACAATATAGCAACACCTGAGAGAGTGGACctgtcttttttaaaatattaatatttttattagtattatgacCCATGTTTAAGGATctgctgaatgttttttttatatgtatttattttgcacgtTTACCTATGTATTATAGACATTTGGCCTTTTAACTTGCTGTGGGTGGTTGTACCCTAGTGTTACTGTGGTTCCCTATGGGGTTCAGCctgccttcactgtgctttaccaGTAATATACCATGGGAAATATTAATATGGCTTGTTTACTGTGGTACACTTTGATTCACTCGTTGTCCAGTGTAGTAAGACAGGCATGTTGAACCCCATAGGGTACGATCATGGTAAAACGAAATGCAGTCCCATGATAAATTTATCAAGGGAGACTTTCCTAAGAGGTGCCAGGCCACCCACTTCTGCACAGCATGGTGagttttgtattataaaaatactttacaacACTTGTAACTGGGATGGCACGGCAGTAACCTATTCTTCAGGGTCTAGTGCTGGTCTAGAGCTAGAACCCTGATCCGGGAAGGTTAATAACtaccccacccacacacacacacacaaacacttcctcagttaaataataatttttccaAAGAAAAGGGAAGATTTAATACTGATTGGTTGAGCAATATGGTGGTTTAGTGGCGGAGTTGATCGCTGGGAGATCACTGGGCATAACCCGGCATTGTTTACAGCTCACCTCATTTAATCCCCAGTGTCTAAAGATTGTTGCTCCATATCCCTGTGcacagccagtcagtcagttagttagttagttagtgtatcagtcagtcaggctgTCAGTATATCAATTGATGTATTGgtgtttcagtcagtcagtccatATATCAGTGTATCAGTAAGCCAGTTAGGCAGGCTACCTGGGAGATTCGTGGGAATCCTCTTCAGCCCCTCCAGGCACTGACCTGGACGGGCTGCACTGACCCATCACTGACATATGTGCCCCAAAACTAAGTGGAATTGTATATTTTGGGGGAAGGGGGACAGTGCAGGAAGAGGACTGCAGATCCCCCTTCCActaggtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtctacactACTGCCCAGCAATGAACATTGCTTATGGCAACTGTCTGTGTatgcacaatgtttttattctgtatagcaaatgcatgtattttacagTGAAGGAGAAAAATCGACCATGTCTGTACACTAGCCTGTGTCTTGCGGTCTTCACACTGTAGAACACTGGCGGAGAGGACAGGGGAGAGCCAGCCATTTGTATAGGCTGAGCCATACACATCTGTACAGGgagttttaatatacatatatggggggtgttgttaaaaaaaaaaggaatttaagcatttcaaaataaaacacttcttCAAACAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012223 True 3087 mRNA 0.50 4 13303056 13307523

Neighbor

gene id symbol gene type direction distance location
AMCG00012218 NA coding upstream 100664 13187382 ~ 13202392 (+)
AMCG00012212 NA coding upstream 120226 13166600 ~ 13182830 (+)
AMCG00012213 NA coding upstream 154482 13144427 ~ 13148574 (+)
AMCG00012211 NA coding upstream 171094 13127168 ~ 13131962 (+)
AMCG00012210 NA coding upstream 181050 13120013 ~ 13122006 (+)
AMCG00012224 mylpf,LOC108249004,LOC108443170 coding downstream 10392 13317915 ~ 13323389 (+)
AMCG00012227 NA coding downstream 218161 13525684 ~ 13527970 (+)
AMCG00012236 NA coding downstream 233630 13541153 ~ 13543947 (+)
AMCG00012229 pelo,LOC107674509 coding downstream 242531 13550054 ~ 13556902 (+)
AMCG00012242 NA coding downstream 388567 13696090 ~ 13700551 (+)
G135117 NA non-coding upstream 4856 13287666 ~ 13298200 (+)
G135110 NA non-coding upstream 41002 13261759 ~ 13262054 (+)
G135067 NA non-coding upstream 55331 12959748 ~ 13247725 (+)
G135097 NA non-coding upstream 86696 13212674 ~ 13216360 (+)
G135073 NA non-coding upstream 316914 12985507 ~ 12986142 (+)
G135131 NA non-coding downstream 65080 13372603 ~ 13397636 (+)
G135137 NA non-coding downstream 109882 13417405 ~ 13421051 (+)
G135138 NA non-coding downstream 119828 13427351 ~ 13427999 (+)
G135226 NA non-coding downstream 170039 13477562 ~ 13484478 (+)
G135250 NA non-coding downstream 223249 13530772 ~ 13531293 (+)
AMCG00012217 NA other upstream 26085 13269196 ~ 13276971 (+)
G135070 NA other upstream 329003 12968377 ~ 12974053 (+)
G135038 NA other upstream 516996 12784088 ~ 12786060 (+)
G135037 NA other upstream 525899 12770783 ~ 12777157 (+)
AMCG00012191 NA other upstream 578862 12702323 ~ 12724194 (+)
G135058 NA other downstream 114912 13422435 ~ 13425359 (+)
AMCG00012228 NA other downstream 163578 13471101 ~ 13508799 (+)
G135240 NA other downstream 211898 13519421 ~ 13520494 (+)
G135264 NA other downstream 276747 13584270 ~ 13585916 (+)
AMCG00012245 NA other downstream 499690 13807213 ~ 13817545 (+)

Expression


Co-expression Network