AMCG00012242


Basic Information

Item Value
gene id AMCG00012242
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13696090 ~ 13700551 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012242
ATGCTATTAGTCTTCACCCTGACGTTGTGGGTAGGGCTAGCCTGGTCTCTCCCTTCCCTGCCCAGCCAATGGGGGCTCACAGGAGCGCCCCCAGAGTGCAAGGAGGCGGAGCTGGCACCAGGGACCAACCTGGCGGGTGAAGGCTATGACATTGTGACGTTGGAGCGGAAGGGCAGCTACGTGATTGATAGCAAGGAGTGGAGGAAGAAAGACAAGACCTGCACTCTGGTCCACAACCCCTACCTGGAGAACAAGCTGCAGAAGGTGCCCCTGTCCGTGGTGGACTGGAGAGCCACAGAGGAGTGCAAGATGAAGGTGTCCAGTTCCTTGTACCAGTCCAGTGATGCTCTGGTCAGCTCCAACAAGGACGAGGTCAGCGACAACTGGAAGGTCAACCTGGATGTGGACGCCAAGCGGGCAGCAGGGAAGGTGATGCTGGCTGGCACCCAGTCCAAGGTGGCGCAGTACTCGATGAACAAAAGTAAGCAGGACAAGTTCAGCTTCACCAGTCAGCAGGTGTCCTGTCGCTACTACAGttatAGACTGTCCAGTAAAGCACGTCTGAGCAGTGAATTCAACCGTGACCTGCAAAATCTCCCAAAGGTATACAACGGTCAGACCAAGGCAGCCTTCTACAAGCTGATCAACACCTATGGCACACACTTCATCAAGCAGGTGCAGCTCGGGGGCCGGGTGCACAGTGTGACATCTATCCGCACCTGCCAGGCGGCGCTGCAGGGGCTGGACTCGGAGGAGGTGCGCACCTGCCTGGACGTGGAGGCGCAGGCCAGCGTTGGCGGGAACTCCCTGAGCAGTGAGGTGAAGCACTGCCAGGAGGCTCGTAAGAACATGGAGAGCAAGAGCCGCTTCTCCAGTACCTTCAACGACCGCTTCACCCAGATCACGGGCGGCCACGTGTCCAGCCCCGAGCTCCTCTTCTCCTCCGACAAGGACCCCGCCGCCTATCAGGAGTGGCTGCAGTCCCTGAAGACCACCCCCGACATCATCTCCTACTCGCTGGATGCCCTGCACGAGCTGGTGCGCCACAAGGGCCCGCTGAAGGACAACCTGCGCCGCGCAGTCAGCCACTACATCCTGGAGCACGCTCTGCTGCTCAACTGCTCCACCCGGTGCCCCGCCGGTGTCAAGAGCAATGCTGGGGACCCCTGCGCCTGCGTCTGCCACAGCAACCCCGGGGTGAACTCGGCCTGCTGCCCCACGCAGAAGGGGCTGTCCCAGGTCACGGTGAAAGTGCGGAGGGCCCACGGCCTGTATGGAGACTACACCACGGCGACCGACAGTTATGTCAAGGTCTTCCTGGGCAGCCAGCAGGTGGGGCGCACCGAGGTGGTCTACAACAACAACGACCCGCGCTGGGGCGCCACCTTTGACCTGGGGTCACAGACGCTCACCATGGGCAGCCAGGTGAAATTCGAGGTCTGGGACGAGGACAACAAATGGGATGATGACCAGCTAGGGGCCTGCGAGGTCCCACTGCGCCGGGGCATAGTGGACAACATCTGCCGGCTCAACCACGGAGAGCTTTACTACTCCCTGCAGGTGGACTGTGCCCCGAGTCTGGGCGGGCCCTCCTGCTCCGAGTATGTGAACACACCCATGGACGCCACACTGCAGGAAGTGTATGTCTCCCGCCATGCCCAGCCCCTGCCCCGCCCCCTGCTGGCTCAGATGGGCGTGGTCTTTGCCGACCCTGTGGGCCTGAatgccagccagccagccagcaaACGCAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012242 True 1755 mRNA 0.61 3 13696090 13700551

Neighbor

gene id symbol gene type direction distance location
AMCG00012229 pelo,LOC107674509 coding upstream 139188 13550054 ~ 13556902 (+)
AMCG00012236 NA coding upstream 152143 13541153 ~ 13543947 (+)
AMCG00012227 NA coding upstream 168120 13525684 ~ 13527970 (+)
AMCG00012224 mylpf,LOC108249004,LOC108443170 coding upstream 372701 13317915 ~ 13323389 (+)
AMCG00012223 NA coding upstream 388567 13303056 ~ 13307523 (+)
AMCG00012241 NA coding downstream 40688 13741239 ~ 13743991 (+)
AMCG00012243 NA coding downstream 86829 13787380 ~ 13788233 (+)
AMCG00012249 NA coding downstream 131030 13831581 ~ 13836820 (+)
AMCG00012248 coro1c,LOC106937262,LOC105025598 coding downstream 137904 13838455 ~ 13841993 (+)
AMCG00012244 LOC105897688,LOC103034594,LOC101477563,LOC103367324,LOC108280818,LOC105894037 coding downstream 159499 13860050 ~ 13877142 (+)
G135282 NA non-coding upstream 22291 13672114 ~ 13673799 (+)
G135280 NA non-coding upstream 30209 13665634 ~ 13665881 (+)
G135255 NA non-coding upstream 70730 13532698 ~ 13625360 (+)
G135257 NA non-coding upstream 154973 13537246 ~ 13541117 (+)
G135250 NA non-coding upstream 164797 13530772 ~ 13531293 (+)
G135358 NA non-coding downstream 201756 13902307 ~ 13904536 (+)
G135359 NA non-coding downstream 204165 13904716 ~ 13905291 (+)
G135355 NA non-coding downstream 204924 13905475 ~ 13906347 (+)
G135366 NA non-coding downstream 227437 13927988 ~ 13956305 (+)
G135356 NA non-coding downstream 245765 13946316 ~ 13948827 (+)
G135264 NA other upstream 110174 13584270 ~ 13585916 (+)
G135240 NA other upstream 175596 13519421 ~ 13520494 (+)
AMCG00012228 NA other upstream 187291 13471101 ~ 13508799 (+)
G135058 NA other upstream 270731 13422435 ~ 13425359 (+)
AMCG00012217 NA other upstream 419119 13269196 ~ 13276971 (+)
AMCG00012245 NA other downstream 106662 13807213 ~ 13817545 (+)
AMCG00012247 NA other downstream 149827 13850378 ~ 13855055 (+)
AMCG00012253 NA other downstream 361686 14062237 ~ 14095797 (+)
AMCG00012262 LOC104967735 other downstream 473362 14173913 ~ 14183167 (+)
AMCG00012268 NA other downstream 546212 14246763 ~ 14296659 (+)

Expression


Co-expression Network