AMCG00012243


Basic Information

Item Value
gene id AMCG00012243
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13787380 ~ 13788233 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012243
ATGGATTCCCTGAAGACCCACCCAGATATTGTCTCCTACTCCCTGAAGCCTCTGCACTTGCTGGTTAGGGAAAACAACATCGCGCAGGCAAATCTGCAGAGAGCTGTGCGTGAGTACATCTTGAAGAATGCCCTCTCCCGCTCCTGCTCCAACCAGTGCAAAGTCGGGAGTCTCAGCGATTCGACCAACCCCTGTCTGTGCAAGTGCCACGGGCAAACTGGCATTGATGCAGACTGCTGCCCCATCAAACCAGGCCTGGCCAAGCTGGTGGTGACTGTGGAGAGAGCAACAGGGCTGTGGGGTGACTATTTCTCCAAGACCGATGCCTACGTGAAGGTTTTCTACCGCAAGCAAAGGGAAGAGACCCCTGTTATCTGGAACAATGACTTTCCTTATTGGGGCCGGGAGATCAAATTTGACACAGTGGAACTCTCCATGTCCCAGCCAGTCAAGTTCGAGGTGTCGGATCGGGACAACAAGTGGGATGATGACCTCCTGGGGAAGTGCCAGTTTGACCTGATAAAGGGGAAGATAAATAAGAAGTGTGGCCTCAAACATGGCTCCCTCTATCAGTGTGGAGTTCGCGCCCAGTCTGGGGGAACCAGGGGCAGCTCCGTCCAGCCAACTACACCTTCGGCCATTAGGGCCTCAGTCTGGAAGGGGAAGCACGCGCGCCATCGCCACAAAATCACCCTGAGGAAAGATCCTCAGGTCAGCTGCAGCAAGATTGGCCATCAGCATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012243 True 744 mRNA 0.54 2 13787380 13788233

Neighbor

gene id symbol gene type direction distance location
AMCG00012241 NA coding upstream 43389 13741239 ~ 13743991 (+)
AMCG00012242 NA coding upstream 86829 13696090 ~ 13700551 (+)
AMCG00012229 pelo,LOC107674509 coding upstream 230478 13550054 ~ 13556902 (+)
AMCG00012236 NA coding upstream 243433 13541153 ~ 13543947 (+)
AMCG00012227 NA coding upstream 259410 13525684 ~ 13527970 (+)
AMCG00012249 NA coding downstream 43348 13831581 ~ 13836820 (+)
AMCG00012248 coro1c,LOC106937262,LOC105025598 coding downstream 50222 13838455 ~ 13841993 (+)
AMCG00012244 LOC105897688,LOC103034594,LOC101477563,LOC103367324,LOC108280818,LOC105894037 coding downstream 71817 13860050 ~ 13877142 (+)
AMCG00012246 LOC106606385,LOC102779737,LOC106597183,LOC107550235,LOC107550268 coding downstream 94011 13882244 ~ 13885130 (+)
AMCG00012255 NA coding downstream 180298 13968531 ~ 13977224 (+)
G135282 NA non-coding upstream 113581 13672114 ~ 13673799 (+)
G135280 NA non-coding upstream 121499 13665634 ~ 13665881 (+)
G135255 NA non-coding upstream 162020 13532698 ~ 13625360 (+)
G135257 NA non-coding upstream 246263 13537246 ~ 13541117 (+)
G135250 NA non-coding upstream 256087 13530772 ~ 13531293 (+)
G135358 NA non-coding downstream 114074 13902307 ~ 13904536 (+)
G135359 NA non-coding downstream 116483 13904716 ~ 13905291 (+)
G135355 NA non-coding downstream 117242 13905475 ~ 13906347 (+)
G135366 NA non-coding downstream 139755 13927988 ~ 13956305 (+)
G135356 NA non-coding downstream 158083 13946316 ~ 13948827 (+)
G135264 NA other upstream 201464 13584270 ~ 13585916 (+)
G135240 NA other upstream 266886 13519421 ~ 13520494 (+)
AMCG00012228 NA other upstream 278581 13471101 ~ 13508799 (+)
G135058 NA other upstream 362021 13422435 ~ 13425359 (+)
AMCG00012217 NA other upstream 510409 13269196 ~ 13276971 (+)
AMCG00012245 NA other downstream 18980 13807213 ~ 13817545 (+)
AMCG00012247 NA other downstream 62145 13850378 ~ 13855055 (+)
AMCG00012253 NA other downstream 274004 14062237 ~ 14095797 (+)
AMCG00012262 LOC104967735 other downstream 385680 14173913 ~ 14183167 (+)
AMCG00012268 NA other downstream 458530 14246763 ~ 14296659 (+)

Expression


Co-expression Network