AMCG00012247


Basic Information

Item Value
gene id AMCG00012247
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13850378 ~ 13855055 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012247
gatggGCTCTGCAATCCAGATGCTATCGGTGGCCCTAGGGCTTCTGGGCCTGGTGGCGGCGGTGGTGTGCTGCGCTGTGCCCCTGTGGAAGCAGTCAGCTTTTGTTGGACAGAACATCGTCACCGCACAGGAGCTGGGACCCTGTATCTTCATTGGCTGGGCTGGGGGGGCCTTGCTGCTGCTGGCAGGGGGGCTTCTGTGCTGCTTTAATGGCCtaaggggggggggtggtgggggcgGGGCAGCCAAGTATTATGCCAACAGCTCAGCGCCACCTAGTAAGAATTATGTG
>TU170021
tccataCCTCTGCCCCACCCTGTCCCGAATTCCTCTTGAAAACAGACCACTCTACCACTCTGcacaacagacaacacacacaggacTACTGCACGGACAcaagtgagaaagagagagaagaagagaagcaaagaagaagaagacggGGTCAACCTCACAGAGAGAACCCTTTTTATTGTGGTAGAAGACTGACTGGAAACATCAGCCAGgatggGCTCTGCAATCCAGATGCTATCGGTGGCCCTAGGGCTTCTGGGCCTGGTGGCGGCGGTGGTGTGCTGCGCTGTGCCCCTGTGGAAGCAGTCAGCTTTTGTTGGACAGAACATCGTCACCGCACAGTACAACTATGAGGGCCTGTGGATGTCCTGCGTGGGCCAGAGCACTGGCCAGCAGCAGTGCAAGAGCTACGACAGCTTGCTGGCCCTGGCGCCGGACCTGCAGGCCGCCCGCGCCATGGTCATGATCAGCTGCATGCTCTGCGGCCTGTCCCTGCTGATCCTGTTCACTGGCGCCAACTTCACCACCTGCGTACAGAACGAGTCGGCCAAGCCCAAGATCAGGCTGGTGGCCGCCGTGGGGCTGCTGCTGGCCGGCCTCCTGCTCTTCATCCCGGTCAGCTGGTCCGCCAACACAGTCATCAAGGACTTCAACAACCAGCTCAACCAGAACAAGAAGGAGCTGGGACCCTGTATCTTCATTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012247 False 292 mRNA 0.61 2 13853948 13855055
TU170021 True 701 TUCP 0.58 3 13850378 13854919

Neighbor

gene id symbol gene type direction distance location
AMCG00012248 coro1c,LOC106937262,LOC105025598 coding upstream 8385 13838455 ~ 13841993 (+)
AMCG00012249 NA coding upstream 13558 13831581 ~ 13836820 (+)
AMCG00012243 NA coding upstream 62145 13787380 ~ 13788233 (+)
AMCG00012241 NA coding upstream 106387 13741239 ~ 13743991 (+)
AMCG00012242 NA coding upstream 149827 13696090 ~ 13700551 (+)
AMCG00012244 LOC105897688,LOC103034594,LOC101477563,LOC103367324,LOC108280818,LOC105894037 coding downstream 4995 13860050 ~ 13877142 (+)
AMCG00012246 LOC106606385,LOC102779737,LOC106597183,LOC107550235,LOC107550268 coding downstream 27189 13882244 ~ 13885130 (+)
AMCG00012255 NA coding downstream 113476 13968531 ~ 13977224 (+)
AMCG00012254 NA coding downstream 124415 13979470 ~ 13982769 (+)
AMCG00012252 LOC107755578,LOC107690283,LOC107729173,LOC107590562,LOC107567734 coding downstream 129409 13984464 ~ 13989166 (+)
G135282 NA non-coding upstream 176579 13672114 ~ 13673799 (+)
G135280 NA non-coding upstream 184497 13665634 ~ 13665881 (+)
G135255 NA non-coding upstream 225018 13532698 ~ 13625360 (+)
G135257 NA non-coding upstream 309261 13537246 ~ 13541117 (+)
G135250 NA non-coding upstream 319085 13530772 ~ 13531293 (+)
G135358 NA non-coding downstream 47252 13902307 ~ 13904536 (+)
G135359 NA non-coding downstream 49661 13904716 ~ 13905291 (+)
G135355 NA non-coding downstream 50420 13905475 ~ 13906347 (+)
G135366 NA non-coding downstream 72933 13927988 ~ 13956305 (+)
G135356 NA non-coding downstream 91261 13946316 ~ 13948827 (+)
AMCG00012245 NA other upstream 32833 13807213 ~ 13817545 (+)
G135264 NA other upstream 264462 13584270 ~ 13585916 (+)
G135240 NA other upstream 329884 13519421 ~ 13520494 (+)
AMCG00012228 NA other upstream 341579 13471101 ~ 13508799 (+)
G135058 NA other upstream 425019 13422435 ~ 13425359 (+)
AMCG00012253 NA other downstream 207182 14062237 ~ 14095797 (+)
AMCG00012262 LOC104967735 other downstream 318858 14173913 ~ 14183167 (+)
AMCG00012268 NA other downstream 391708 14246763 ~ 14296659 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other downstream 520578 14375633 ~ 14377651 (+)
G135544 NA other downstream 522617 14377672 ~ 14378695 (+)

Expression


Co-expression Network