AMCG00012255


Basic Information

Item Value
gene id AMCG00012255
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13968531 ~ 13977224 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012255
ACAGAGCCCCTGTTGCGTAATGGCTGTGACCTGGGTgtcaaggtcaaaggtcagacaCCCGAAATAGAGCTGCAAATCCAAGAGCTgttgggtgtgtgtgaCAAAACCACGGAGGAGTGCCTGGCGTACTTTGGGGTGAACGAGAACACAGGCCTCTCCCCTGAGCAGGTCAAGAAGAACATGGCAAAGTACGGCCCCAatgGTAAGACCCTGTGGGAACTGGTGGCAGAACAGTTTGAGGATCTCCTGGTCAGGATCCTGCTGCTGGCTGCTTGCATCTCCTTCGTAAGTCTGACCCCCATCCTTGCCTGTCTGCCTCTGTCTGGTCTGTCTGCCTGTTAG

Function

GO:

id name namespace
GO:1990351 transporter complex cellular_component
GO:0034702 ion channel complex cellular_component
GO:0034703 cation channel complex cellular_component
GO:0034704 calcium channel complex cellular_component
GO:0005891 voltage-gated calcium channel complex cellular_component
GO:1902495 transmembrane transporter complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012255 True 342 mRNA 0.55 3 13968531 13977224

Neighbor

gene id symbol gene type direction distance location
AMCG00012246 LOC106606385,LOC102779737,LOC106597183,LOC107550235,LOC107550268 coding upstream 83401 13882244 ~ 13885130 (+)
AMCG00012244 LOC105897688,LOC103034594,LOC101477563,LOC103367324,LOC108280818,LOC105894037 coding upstream 91389 13860050 ~ 13877142 (+)
AMCG00012248 coro1c,LOC106937262,LOC105025598 coding upstream 126538 13838455 ~ 13841993 (+)
AMCG00012249 NA coding upstream 131711 13831581 ~ 13836820 (+)
AMCG00012243 NA coding upstream 180298 13787380 ~ 13788233 (+)
AMCG00012254 NA coding downstream 2246 13979470 ~ 13982769 (+)
AMCG00012252 LOC107755578,LOC107690283,LOC107729173,LOC107590562,LOC107567734 coding downstream 7240 13984464 ~ 13989166 (+)
AMCG00012251 NA coding downstream 71728 14048952 ~ 14057554 (+)
AMCG00012260 NA coding downstream 122876 14100100 ~ 14117969 (+)
AMCG00012263 NA coding downstream 209503 14186727 ~ 14199995 (+)
G135366 NA non-coding upstream 12226 13927988 ~ 13956305 (+)
G135356 NA non-coding upstream 19704 13946316 ~ 13948827 (+)
G135355 NA non-coding upstream 62184 13905475 ~ 13906347 (+)
G135359 NA non-coding upstream 63240 13904716 ~ 13905291 (+)
G135358 NA non-coding upstream 63995 13902307 ~ 13904536 (+)
G135506 NA non-coding downstream 249766 14226990 ~ 14232263 (+)
G135540 NA non-coding downstream 390825 14368049 ~ 14368337 (+)
G135542 NA non-coding downstream 395816 14373040 ~ 14373945 (+)
G135575 NA non-coding downstream 540992 14518216 ~ 14521605 (+)
G135582 NA non-coding downstream 558300 14535524 ~ 14538864 (+)
AMCG00012247 NA other upstream 113476 13850378 ~ 13855055 (+)
AMCG00012245 NA other upstream 150986 13807213 ~ 13817545 (+)
G135264 NA other upstream 382615 13584270 ~ 13585916 (+)
G135240 NA other upstream 448037 13519421 ~ 13520494 (+)
AMCG00012228 NA other upstream 459732 13471101 ~ 13508799 (+)
AMCG00012253 NA other downstream 85013 14062237 ~ 14095797 (+)
AMCG00012262 LOC104967735 other downstream 196689 14173913 ~ 14183167 (+)
AMCG00012268 NA other downstream 269539 14246763 ~ 14296659 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other downstream 398409 14375633 ~ 14377651 (+)
G135544 NA other downstream 400448 14377672 ~ 14378695 (+)

Expression


Co-expression Network