AMCG00012264


Basic Information

Item Value
gene id AMCG00012264
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14224711 ~ 14231369 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012264
ATGGCGGAAAAGgACTCGGACAGCAGTGACAGTGACGTCGAGGTCATCGTCCCCGTTGCCCCCCCCGCAAAGCGACGGCGAATCATCGACCCCGCTGCCATTGTGTCCGTCCCTGTGTATTCCAACAAGgcagaggaggagcaTAACCTCTGGCCTCAGACCCCGAAAAGCAAGAGAGACAAGAAGGGCGAGACAATCTGCCTCTCgtcggaggaggaggaggagaaggaggaggagtcAGCCAAAGAGCAAAGCTGTATTCGCTCCCCCTCTCCACCCTCCCCACCTCAGCGCCTCCCTGCGAGGACCCGGCGTTCCAACCGCAAGATGAGggagatCAACAGGAGGTTGAATGCGATCGGCTCTCTGCTGTCTCCACAGCAGGAAGTGAGGAGGGCCGCCATCTCTGATGACGACGATGATATCATCATTGTCTCCTCCCCCAGGACGGAGGCCCTGGACTCTGATTCGCCGAGGGAGATCGTACTGAAGTTCCGTAGCCGCACCGACCTGTTCAAGATCCCCATTCAATCAACATCTCCCCTGAGTGAGGCCGTGGAGCAGCTGTCACTCAAACTCCAGGTCCCGCCCTCCCGCATCCTGCTGCTGCGGAAGGAGGTGGAACTTCCTGTCGACGCCACAGCGACCAAGCTGGGGCTGGGCATAACTGACATCATCGACTGTGTAGTGAtcacggaggaggaggacagacagacagacgcggGCGCTGATGCCGACACCATCACTATCCGACTGCAGGGCCAGGAGAGAGGCTCGGGGGAGGACTTCACCTTGCACAAGgaTGCGCCTCTGGGTCTAGTCCTCAAACAGTATGTCTCTCGACTGGCCCTGGGGCAGAGGCAGTCGGTGCGCTTCCTGTTTGACGGGTCGAAGGTCAACGAGAGCCACACCCCCTCCCAGCTGGAGATGGAAGACGGTGATGTCATCGAGGTGTGGGCCTGACAAAGGCATCGCTGCAGGATGGGATGGCGAAGGGATGGCGGGTGGGGGTGACATCTTCACAATCACTGCATCCTGACTTTATAGCACtaatagagagggagagagggtgggagggTGCCTGTTCGCACCCATTCTCTcattctttccttttctcttcttctcctcactggattgttattatgatttttattatcattattcatattcatagtATTATTAGTGTCTGCACTTCCCCTGCTGTCCTGTACAGAGTGAGGGGGTGCTCTGTTCCTCACTTGTTTGTTACTCTAAGTATTATTTAGTCTTCTCATCAGGGAAAAAAGCTctctgccccctccctctctccgtccCTGCCctatctccctctccccctgtgtcaatacatttgtgtttttgtgttcaaGCACCTTGATTAAtaaattgtttttgtacagAGCTTCAGGGCTCCTCTCTCTGACACTAGGAGGTATAGTGCTGCTCTGTGGAGCCACcaagacagggagagagatagagagacagactgacacacagccCAACGGAGAGAGATTTCCGTTCATGAAAAAACAATCTTTGGTCCAATTTAAGTTTTgacacattcaaaacaatgtaGCACTCTTGCAAACTAATCAATCTGGCAGCAGATAGCGCCTGAAACTCATTCCCCCAGTGGTGTAAATCAACGCAACATGAAACCACTGTACAAACAAGTGAGCTGCCAGAGAGCAGTGTGTCCTGTGTGGGCCTGGCGTTGTCCGCCCTCCTGCCTGCACACACTGACGAtatttcacaaatgtgttttgactCCTTGCCCCTGCAGTTTACACCCGTATCTGGTCTGCAAGACGCCGATGCAGAATACAACCAGGAAGAATCGTCCGGGGTAAATACAGTCGCTTGTTGTGTAGATGAGGAATGAGGAAAAATAGTGCTTTTAGGCCTCTGGACTGTGGagtggagggtcatgggttcaatcccaggtgggggacactgctgttgtacccttgaagAAGgaactgtacctagattgctccagtaaaagcCCAGCTGTATAGATAGGGTGATTGCATGTAAAAATGTAAGGTGATCTATTGTAACTGTTTTTACCCTGGACGAGGGCATATACaaagaaatattatatattttggttgATTTTCAGTCAAATGCTGTTTTTAACATTGGCTAGCCCTCTCCTGAAACCACACGTGCTTGAAAGGCCACATGTGGAACCAGGTGAGATTGTGACTCACGTTTGTATTTGGCACCGATGTTGCTGTGAAAGTGGGGTGTGTGACTATACTAGAACCACACcagtattttctttctctgggCAGTCAATATTGGCCAGAAAAATAGGGGGTTTCATGGAGTTTGGAGTGTGTGCTCTCTGTGCTTGTTAAGGTTGCAGGGGATCCACCCGGGGAGCTGGTCCGCTGGGAGCACAAGATGAGAATGCGGATGTATGCTTTACAAGAGGAGAAATTAGAGTGGGAAATGTCCGTCTTGAAAGCCACTTTGCCTCAGCTACTGTGTAAGAGAGATTGTAAATAGATTAACAGGATTGCAGTGTCCTGAAGTTcataataaatctgttttttttcccccaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012264 True 2567 mRNA 0.51 8 14224711 14231369

Neighbor

gene id symbol gene type direction distance location
AMCG00012265 NA coding downstream 630 14217340 ~ 14224081 (-)
AMCG00012259 NA coding downstream 54429 14166467 ~ 14170282 (-)
AMCG00012258 NA coding downstream 142484 14076148 ~ 14082227 (-)
AMCG00012257 NA coding downstream 179597 14044629 ~ 14045114 (-)
AMCG00012256 NA coding downstream 228627 13989878 ~ 13996084 (-)
AMCG00012272 NA coding upstream 49567 14280936 ~ 14293538 (-)
AMCG00012271 NA coding upstream 96749 14328118 ~ 14332821 (-)
AMCG00012270 NA coding upstream 140585 14371954 ~ 14377641 (-)
AMCG00012269 NA coding upstream 146449 14377818 ~ 14386628 (-)
AMCG00012283 NA coding upstream 291736 14523105 ~ 14523458 (-)
G135481 NA non-coding downstream 22825 14200261 ~ 14201886 (-)
G135483 NA non-coding downstream 31339 14176897 ~ 14193372 (-)
G135467 NA non-coding downstream 110508 14113040 ~ 14114203 (-)
G135430 NA non-coding downstream 150624 14070491 ~ 14074087 (-)
G135443 NA non-coding downstream 173846 14049530 ~ 14050865 (-)
G135525 NA non-coding upstream 66366 14297735 ~ 14302369 (-)
G135551 NA non-coding upstream 136666 14368035 ~ 14368397 (-)
G135799 NA non-coding upstream 203606 14434975 ~ 14435728 (-)
G135802 NA non-coding upstream 209396 14440765 ~ 14442102 (-)
G135851 NA non-coding upstream 441642 14673011 ~ 14691919 (-)
AMCG00012261 NA other downstream 130023 14090068 ~ 14094688 (-)
G135318 LOC100846954 other downstream 519099 13704846 ~ 13705612 (-)
AMCG00012238 NA other downstream 557104 13610486 ~ 13667607 (-)
AMCG00012233 NA other downstream 699896 13519666 ~ 13524815 (-)
AMCG00012226 cd2bp2 other downstream 924290 13296419 ~ 13300421 (-)
G135814 NA other upstream 288461 14519830 ~ 14523063 (-)
AMCG00012281 NA other upstream 300086 14531455 ~ 14534440 (-)
AMCG00012292 NA other upstream 364789 14596158 ~ 14602841 (-)
AMCG00012291 NA other upstream 377441 14608810 ~ 14650327 (-)
G135856 NA other upstream 486103 14717472 ~ 14721170 (-)

Expression


Co-expression Network