AMCG00012277


Basic Information

Item Value
gene id AMCG00012277
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14427959 ~ 14434886 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012277
agagagagggagagagggggactGAGAGGGGCAGTGCGCGAGAGCAGGGAAGGTGTAAGAGAAAGATTAAGAGGGAGGGGTGCAggcagagggaaagagagagggagcagtaGATAGACAGAGGAAGGCTAGAGGCTCAGTTTGTCAGTTCATacatcagtctgtcagtgtgccagtcagaTAGCCGGTGGTGTGACAGATGGCAGAAGAAATGTCATACTCCGCTGCGATAGAGGAGGCCGGCCAAGTTATGTGCAGGTTCCCTCTGAAGCATGTGGATGGGGTGCCACTGATGAACCTAATCGTAGACAGATGGGACGAGATTGCTGCCTTCACCCCTGACCCCTCTGACATGCTTATCGCCACATACCCCAAAGCAGgcACAACCTGGACTCAGGAGATAGTGGACCTGATAATCCATGAGGGCGATGCTGAGGCCTGTCGCCGAGCGCCCACTTTCGTCAGGATGCCTTTCATGGAGATTGTCTCACCCAGGCCCATCCCCTCCGtGGCCTGGGGCTCCTGGTATGACCATGTGAAGGGGTTctgggtggagagggagaggaggaacaTTCTGTACCTCTTCTATGAGGACATGAAGGAGAATCCTCGGCGGGAGGTGGTGCGCATCATGGAGTACATGGGGCGGGCGCTGCCTGATGATGTCATCGACCGCATCGTCGAGCTCACTTCCTTCCAGGTGATGAAGGAGAACCCCATGACCAACTACACCACCCTCCCCAAGAGCGTGCTCGACCAATCCGTCTCTCGGTTCATGAGGAAAggGGAGGTAGGGAACTGGGCCAGTcacttctctccctctcagagtCGGGAGTTTGACGAAGACTACGAGCACCAGATGGGCGGGGCCGGCATTCCCTTCCGCACCCAACTGTGAGGGAGCGCCTGCAATGAGCCCCTCCGCCACCGCCCAGGGACTATCTGGAAACTCAGCAGCCACAATCCACAAAAACATAGAGGATTGAAGGTGGGGTGGGTGGCGGGTTTGGGGCAAGGGATGATAGcatgagggagagggggaatgATGCAGGATGTAGTATGTAGGCCATAATTGTAGCTGCCCACTATAGCACTCAATTTCTGAGCTcaattctaaataaaataatttgactgCAGAAAATCCCACTGGACTGCACCGCACTGGACTAGACCATATTGCATTGGACTAGTTTGGTCTGCACTGGACTGGTGTGCAgagtactgtactatactggaCTGTACTCTACCACACTAAATTATGGGTGCCTCTTAATTGAGAGATTATTTTgggtaaattaagtaaaatagaGCAGATTAAAATGCTGAGGAGTTTACAAAACATCATTCCtctatttaaaagaaaattgtattaatataatcatCTTATGCCACTGGTTGACATTGCTTCTTAAATAATACTTGAATGTAGTCACTTCAGTggtctgctttttgtttttatgaacagACTAATTTACAGTGTACCAACCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012277 True 1491 mRNA 0.51 5 14427959 14434886

Neighbor

gene id symbol gene type direction distance location
AMCG00012274 NA coding upstream 4319 14416007 ~ 14423640 (+)
AMCG00012276 NA coding upstream 17519 14399113 ~ 14410440 (+)
AMCG00012266 NA coding upstream 55363 14337873 ~ 14372596 (+)
AMCG00012273 NA coding upstream 113523 14312287 ~ 14314436 (+)
AMCG00012263 NA coding upstream 227964 14186727 ~ 14199995 (+)
AMCG00012278 NA coding downstream 3822 14438708 ~ 14443094 (+)
AMCG00012275 NA coding downstream 10178 14445064 ~ 14452229 (+)
AMCG00012279 NA coding downstream 132481 14567367 ~ 14570192 (+)
AMCG00012284 asphd2,LOC105891569,LOC107687974,LOC106585499 coding downstream 189633 14624519 ~ 14627965 (+)
AMCG00012285 LOC106579440,LOC106676660,LOC101486406,LOC100704476,LOC105890664,LOC108425940,LOC107578711 coding downstream 203084 14637970 ~ 14638967 (+)
G135542 NA non-coding upstream 54014 14373040 ~ 14373945 (+)
G135540 NA non-coding upstream 59622 14368049 ~ 14368337 (+)
G135506 NA non-coding upstream 195696 14226990 ~ 14232263 (+)
G135366 NA non-coding upstream 471654 13927988 ~ 13956305 (+)
G135575 NA non-coding downstream 83330 14518216 ~ 14521605 (+)
G135582 NA non-coding downstream 100638 14535524 ~ 14538864 (+)
G135594 NA non-coding downstream 128690 14563576 ~ 14576998 (+)
G135595 NA non-coding downstream 135489 14570375 ~ 14610737 (+)
G135606 NA non-coding downstream 162244 14597130 ~ 14601583 (+)
AMCG00012267 NA other upstream 38274 14388038 ~ 14389685 (+)
G135544 NA other upstream 49264 14377672 ~ 14378695 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other upstream 50308 14375633 ~ 14377651 (+)
AMCG00012268 NA other upstream 131300 14246763 ~ 14296659 (+)
AMCG00012262 LOC104967735 other upstream 244792 14173913 ~ 14183167 (+)
G135566 NA other downstream 79 14434965 ~ 14435728 (+)
G135573 NA other downstream 149238 14584124 ~ 14585770 (+)
AMCG00012294 NA other downstream 275358 14710244 ~ 14726783 (+)
AMCG00012300 NA other downstream 529158 14964044 ~ 15245994 (+)
G135649 NA other downstream 553412 14988298 ~ 15009803 (+)

Expression


Co-expression Network