AMCG00012278


Basic Information

Item Value
gene id AMCG00012278
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14438708 ~ 14443094 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012278
ATTGAGAAACTGCAGAAGAGGACTAGAGACCTGGGCAAGGGCGTCTGCACAGAAAGAGGGACCCGGACGGGGCAGAGtgacGATGTCTCAGCCAGCGCCTGAAGTAGGTTCCCCTGAGCCAGTGGGTGAGGAGTCAGAGTTCGGGGGTCGTGAGGAGATTGTACTGTGGGAGGGGCTGCCCCTGATGCCCTCGGTGGTACGCTGCTGGGACGGGATCCAAAACTTCGCAGCCAGACCCGATGATATCCTGATAGCCACCTACCCTAAGgctggcactACCTGGGTGGTGGAGATGGTGGATGCAGTGCTGGCGGAGGGGGACATGTCTCGCTGTCTCCGCATCCCCACTTTCAACAGAGCCCCCTTCCTGGAGCTCAACCCCCTGCCACCATTCCCCTCTGGCCTGCAGTTGTTGCAGTCCATGCCATCGCCCAGGCTGGTGAAGACGCACTTTCCTGTCCATTTGGTGCCCCAGTCCTTCTGGGACAATGACTGCAAGGTGGTGTACGTAGCTCGCAATGGGAAGGACAACATGGTGTCCTATTTCCACTTCCAGAGGATGAACCAGAAACTGCCGGAGCCTGGGACCTGGGACGAGTACTTCACAGCCTCACTCAATGGACAGGGACCCTGCCAGAGAGATCACCCGTTTGGCCAAATTCCTGGGGAAGGGGCTGGACCAGGCAGTGATTGACAGGATTGTGGACCACACATCCTTTAGCAGCATGAAGGACAATCCAATGACCAACTACACCGTCCTGCCCTCCTTCGTCTTCAACCATTCGGTGTCTCCCTTCATGCGGAAAGgggaggTAGGTAGCTGGAAGACTCAGTTCACGGTCTCTCAGAACGAGCGCTTCGACGAGGAGTATCGCCGGCGCATGACCGACCCCTCCCTGATCTTCCGCACGGAGCTCTGAGCCCCCCGGACTACGGCTCCCATCAGCCCCTCTGTTCCACCCAGCAGGGGATGACTACGGATCACACCCCTAACTGGACTACAACTTCCAGCGACCCTTTGTGAGGAACTCCCATGATGCAAACTGCAGCATTCCCCAATCCCCCTTGGCACATATATGAAGGACAACGGTTTCTACCATTGAGTACAGTATGGATCTACATCTAAAATGCATCACCTGTCACTGAAGAATCATCTGAAGAACACTACATCTCCCACGATGCACCTCTGCTATGGTTGGAATAAATGATGTAaagggacaaaaataaaagtgctaACTAAGTTTTCAACCCAGACGACACATGTCTTATAATAGTCCTGCGATGTAGGCCTATGTATGTtaggtgtgtgttttgtacattgtctaaaagggaaatatttgtgtattaattgtactgtattaaacaaaacattaacaaaataattacttatttgGTGAAGTATAGCTTTTTATGCTGTCTGATAAACtgtcttggtttgttttaatgtaataaaaacagaactaaT

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012278 True 1465 mRNA 0.52 7 14438708 14443094

Neighbor

gene id symbol gene type direction distance location
AMCG00012277 NA coding upstream 3822 14427959 ~ 14434886 (+)
AMCG00012274 NA coding upstream 15068 14416007 ~ 14423640 (+)
AMCG00012276 NA coding upstream 28268 14399113 ~ 14410440 (+)
AMCG00012266 NA coding upstream 66112 14337873 ~ 14372596 (+)
AMCG00012273 NA coding upstream 124272 14312287 ~ 14314436 (+)
AMCG00012275 NA coding downstream 1970 14445064 ~ 14452229 (+)
AMCG00012279 NA coding downstream 124273 14567367 ~ 14570192 (+)
AMCG00012284 asphd2,LOC105891569,LOC107687974,LOC106585499 coding downstream 181425 14624519 ~ 14627965 (+)
AMCG00012285 LOC106579440,LOC106676660,LOC101486406,LOC100704476,LOC105890664,LOC108425940,LOC107578711 coding downstream 194876 14637970 ~ 14638967 (+)
AMCG00012293 NA coding downstream 210345 14653439 ~ 14655115 (+)
G135542 NA non-coding upstream 64763 14373040 ~ 14373945 (+)
G135540 NA non-coding upstream 70371 14368049 ~ 14368337 (+)
G135506 NA non-coding upstream 206445 14226990 ~ 14232263 (+)
G135366 NA non-coding upstream 482403 13927988 ~ 13956305 (+)
G135575 NA non-coding downstream 75122 14518216 ~ 14521605 (+)
G135582 NA non-coding downstream 92430 14535524 ~ 14538864 (+)
G135594 NA non-coding downstream 120482 14563576 ~ 14576998 (+)
G135595 NA non-coding downstream 127281 14570375 ~ 14610737 (+)
G135606 NA non-coding downstream 154036 14597130 ~ 14601583 (+)
G135566 NA other upstream 2980 14434965 ~ 14435728 (+)
AMCG00012267 NA other upstream 49023 14388038 ~ 14389685 (+)
G135544 NA other upstream 60013 14377672 ~ 14378695 (+)
G135541 adprh,LOC107387950,LOC101076629,LOC105024377,LOC103481379,LOC103381590,LOC107094293 other upstream 61057 14375633 ~ 14377651 (+)
AMCG00012268 NA other upstream 142049 14246763 ~ 14296659 (+)
G135573 NA other downstream 141030 14584124 ~ 14585770 (+)
AMCG00012294 NA other downstream 267150 14710244 ~ 14726783 (+)
AMCG00012300 NA other downstream 520950 14964044 ~ 15245994 (+)
G135649 NA other downstream 545204 14988298 ~ 15009803 (+)
G135670 NA other downstream 676631 15119725 ~ 15623881 (+)

Expression


Co-expression Network