Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012281 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 14531455 ~ 14534440 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0002088 | lens development in camera-type eye | biological_process |
| GO:0060219 | camera-type eye photoreceptor cell differentiation | biological_process |
| GO:0008654 | phospholipid biosynthetic process | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0010842 | retina layer formation | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012281 | False | 507 | mRNA | 0.58 | 3 | 14531455 | 14534440 |
| TU170641 | True | 726 | TUCP | 0.58 | 6 | 14531473 | 14534272 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012282 | NA | coding | downstream | 4033 | 14523821 ~ 14527422 (-) |
| AMCG00012283 | NA | coding | downstream | 7997 | 14523105 ~ 14523458 (-) |
| AMCG00012269 | NA | coding | downstream | 144827 | 14377818 ~ 14386628 (-) |
| AMCG00012270 | NA | coding | downstream | 153814 | 14371954 ~ 14377641 (-) |
| AMCG00012271 | NA | coding | downstream | 198634 | 14328118 ~ 14332821 (-) |
| AMCG00012280 | taok2,LOC108278428,LOC106600755,LOC106583946 | coding | upstream | 4351 | 14538791 ~ 14563905 (-) |
| AMCG00012290 | NA | coding | upstream | 37572 | 14572012 ~ 14584023 (-) |
| AMCG00012288 | NA | coding | upstream | 50659 | 14585099 ~ 14593743 (-) |
| AMCG00012289 | kctd13 | coding | upstream | 70425 | 14604865 ~ 14607059 (-) |
| AMCG00012286 | NA | coding | upstream | 131683 | 14666123 ~ 14668687 (-) |
| G135802 | NA | non-coding | downstream | 89353 | 14440765 ~ 14442102 (-) |
| G135799 | NA | non-coding | downstream | 95727 | 14434975 ~ 14435728 (-) |
| G135551 | NA | non-coding | downstream | 163058 | 14368035 ~ 14368397 (-) |
| G135525 | NA | non-coding | downstream | 229086 | 14297735 ~ 14302369 (-) |
| G135481 | NA | non-coding | downstream | 329569 | 14200261 ~ 14201886 (-) |
| G135851 | NA | non-coding | upstream | 138571 | 14673011 ~ 14691919 (-) |
| G135859 | NA | non-coding | upstream | 222082 | 14756522 ~ 14757029 (-) |
| G135864 | NA | non-coding | upstream | 284415 | 14818855 ~ 14819936 (-) |
| G135913 | NA | non-coding | upstream | 969977 | 15504417 ~ 15507652 (-) |
| G135973 | NA | non-coding | upstream | 1276356 | 15810796 ~ 15811753 (-) |
| G135814 | NA | other | downstream | 8392 | 14519830 ~ 14523063 (-) |
| AMCG00012261 | NA | other | downstream | 436767 | 14090068 ~ 14094688 (-) |
| G135318 | LOC100846954 | other | downstream | 825843 | 13704846 ~ 13705612 (-) |
| AMCG00012238 | NA | other | downstream | 863848 | 13610486 ~ 13667607 (-) |
| AMCG00012233 | NA | other | downstream | 1006640 | 13519666 ~ 13524815 (-) |
| AMCG00012292 | NA | other | upstream | 61718 | 14596158 ~ 14602841 (-) |
| AMCG00012291 | NA | other | upstream | 74370 | 14608810 ~ 14650327 (-) |
| G135856 | NA | other | upstream | 183032 | 14717472 ~ 14721170 (-) |
| G135857 | NA | other | upstream | 191070 | 14725510 ~ 14794158 (-) |
| G135957 | NA | other | upstream | 1172494 | 15706934 ~ 15732134 (-) |
