AMCG00012295


Basic Information

Item Value
gene id AMCG00012295
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 14744315 ~ 14754009 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012295
ATGACACGATTAGTACCTCAGCGCTTCATCGCAGTTGGATATAAAGGGATGAAGCCCGACCCTTCGGAGTGGCTCTGTGTGATTGCCCTGCTGCTGCAGCACTGCTCAGTCTCAGGATCAGGGGTGGTGGTcaatcccctcccccccaacaaCAACACTGGGGGCATCTTCTCGAACAGGAAGTTCAGAATGGATGGGAGGAAGTGGAATTTTCAGGTTCTCGGCCCCACTAAACCCTTTGTCATCTTCGCCGGAGAGGATGCCATTCTGCCTTGTCATCTCTCGTCCCGCATCAGCGCAGTGGGCATGGAGATCAGGTGGTTCAGAGAGGACCACTCGGCGCCTGTGTGTCTACACTGGAGGGGCAAGTACGACAACGAGAAGCAGATGGCAGCCTACCAGAACAGGACACGACTCTTCCCAGAGGAGTTCAGGACAGGCAACGTGTCTCTGGGCCTGATGGCGGTGCGAGGCTCTGACGACGGTCGCTACAGATGTCTGGTTCAAATTGACGAGTGGTACGAAGAAGCTCTCATTGACGTTGTCGTGAAAGCTCTGGGGACCCTGTCCACAGTGTCCCTCCACTCTGAAGGAGGTCAAAcccagctgcagtgcaggtcaGAGGGATGGTACCCTGCGCCCACAGTGATGTGGACAGACAGCAACGGGCACAACGTCACCAATCAATCCAAGACCACGGTGGAGAGTGACGGTCAGGGGCGTTTGAATGTCAGAAGCTACTTCCCACTCAGACAGAATTCCAGTGTCTTCTGTTGCCTGATCCGGAGCACAGTGCCTGAACCAGACTGGGCATCCCAGCTCCACATAGCCATGGACTTCTTCCCTTACCCCTGTGGGTGGATGGTGGCCTTCCTCCTCACCACAGCTCTCTCTGTGGTCACTGGTGTGGTGGCGGTTCCTCTTCTGTTGAGGCAGTGGAGGAGAATGGACAAGGAGGAGAATCTGTGGGCATTTAAAGTGGACGTGACGCTGGACCCTGACGTGGCGTACTGTGAGCTCGCCCTCTCCGAGGATGGGAAGAGAGTACGACGGGGAAAGCTGCGGGAGGTTCCCGACAACCCCCGGCGCTTCGACTCCTGGTGCTGCACCGTGAGCCGGGAGAGCTTCACCTCGGGGACACACTACTGGATGGTGGAGGTCAACGGCTGGTGCAGGATAGGCGTGGCTCGGGAGTCCGCCCAGAGGAAGGGGAAGTTCGCCTTCACGCCCCAGCAGGGATACTGGGCTTTGGGATCCTTCTCTTCCGATTTCTCGGCGCTCACCGACCCTGTGACTCCCCTCCCCCAGAGCCTACAGCCCAGCCGGATGGCGGTGTGTGTGGATCTCTGGAGGAGGCGGGTCTCCTTTTACAAAGTGGAGTCCAGGGCTCATATCTACACCTTCGCTGACATTCAGTTCACTGAGGGAGATAAGCTCTATCCCTTCTTCTGGACTCTGGATATGAATAGGGACCTAGTTATTCTGCCTCCTGTTGGCTCTGTAGATTAA

Function

GO: NA

KEGG:

id description
K06712 BTN, CD277; butyrophilin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012295 True 1509 mRNA 0.57 8 14744315 14754009

Neighbor

gene id symbol gene type direction distance location
AMCG00012297 NA coding downstream 44180 14698531 ~ 14700135 (-)
AMCG00012296 LOC107582906 coding downstream 50164 14691414 ~ 14694151 (-)
AMCG00012287 LOC106942595,LOC107568190 coding downstream 60515 14673333 ~ 14683800 (-)
AMCG00012286 NA coding downstream 75628 14666123 ~ 14668687 (-)
AMCG00012289 kctd13 coding downstream 137256 14604865 ~ 14607059 (-)
AMCG00012299 NA coding upstream 210016 14964025 ~ 15050603 (-)
AMCG00012301 NA coding upstream 310120 15064129 ~ 15105136 (-)
AMCG00012304 NA coding upstream 620340 15374349 ~ 15378863 (-)
AMCG00012312 NA coding upstream 1010010 15764019 ~ 15803519 (-)
AMCG00012311 NA coding upstream 1110053 15864062 ~ 15874730 (-)
G135851 NA non-coding downstream 52396 14673011 ~ 14691919 (-)
G135802 NA non-coding downstream 302213 14440765 ~ 14442102 (-)
G135799 NA non-coding downstream 308587 14434975 ~ 14435728 (-)
G135551 NA non-coding downstream 375918 14368035 ~ 14368397 (-)
G135525 NA non-coding downstream 441946 14297735 ~ 14302369 (-)
G135859 NA non-coding upstream 2513 14756522 ~ 14757029 (-)
G135864 NA non-coding upstream 64846 14818855 ~ 14819936 (-)
G135913 NA non-coding upstream 750408 15504417 ~ 15507652 (-)
G135973 NA non-coding upstream 1056787 15810796 ~ 15811753 (-)
G135975 NA non-coding upstream 1059111 15813120 ~ 15816171 (-)
G135856 NA other downstream 23145 14717472 ~ 14721170 (-)
AMCG00012291 NA other downstream 93988 14608810 ~ 14650327 (-)
AMCG00012292 NA other downstream 141474 14596158 ~ 14602841 (-)
AMCG00012281 NA other downstream 209875 14531455 ~ 14534440 (-)
G135814 NA other downstream 221252 14519830 ~ 14523063 (-)
G135957 NA other upstream 952925 15706934 ~ 15732134 (-)
G135988 NA other upstream 1167595 15921604 ~ 15925153 (-)
G136070 NA other upstream 1466117 16220126 ~ 16227243 (-)
G136125 NA other upstream 1558712 16312721 ~ 16314393 (-)
AMCG00012340 NA other upstream 1661098 16415107 ~ 16432813 (-)

Expression


Co-expression Network