AMCG00012304


Basic Information

Item Value
gene id AMCG00012304
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 15374349 ~ 15378863 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012304
ATTACTTTCGGGGTTAGTAATGTTTGTGAGTGAACTGGGCTTCTGCGCTGAGTGAAGAGGCGTTTGGgttattggttgttgtttttgttcctctCTTCTCTATTCAGAGGCTTTATCAGTTGCTTGTTCTGTGAAATGAAGCTGTTCCGCATTGTGCTCTGGCTCTGTGTAGGAGCATTATTACCCGCACTGATCTTGGCCAGCCCAGACTACGACAATGAGCCTGCAAGAACAACCGCTGTCAATACCGAGCCTAAAAAGTACCGTGTTCTCCCCATGTTCATCCAGGCGTCTGCTCCTCTGGTAGACGCCAAGAAACTGCGTCCGGCCAATGGCAGCGAGCCCATGCCTGATGATCTGAGACGCATCCTGTTTCCTGGCGCCAACCTGCGGAAAGGCGTGCAGCCCAAGAAAGTCCAGAACCGAGGTGTTGCGGTGTGGGGAGACTACAGTAAGCTGTATGTGGCAGTGCAGAAGGACATCCATGGCTTCAGGTGCAGGCCTTCAGAGCTCATGCTGGGGAGCTGTGCTGTCAGCCAGACCTCAAAGCACTTCTACTACTTCACCTATGGGCTTAACGAGTGTGGGACCAAGCGATCGATCGTTAATGGCCAACTGGTGTACTCCAACACACTGCGCTATTCTCCGCCAGTGTTCTCTGGCCCAGTTATCTGGGGTGTGTCCTTCACCGTGCCCATTATGCTAGTCTACAACAGGTTCCACTATTCCTACAAGATTGGCTATAAGCCCACATTCCCCCAGCATGGCAGCACCCTTCCAGGCATGGACAAATTTGCCTTCTTTAGAGAGCTGAAGAACAGACATGGTTACGTCCTGGTCACCACCAATGAGCACTGGCAGAGACTCTCCCCAAAGAACGTCTACTACCTGGGCCAGGCCATGTACTTCCAGGCCACAGGCTATTTGGCCACGACAGGGCAGCGGCTATTCATCCAGTCCTGCTATGCCACGGCCTCTCCGGATCAGCACTCCAAACCCAGGTTCACCGTGATTGACAACTTTGGGTGCCTGGTAGACAGCAAGGCTGATGGGTGCCAGTCCAGGTTTGTGCCGTACAGGAGGAAGGATGTTCTCCGCTTCACCATTGATGCTTTCCTGTTCCAGAAGACCCTGTCCAAGCATGGGATGACTGAGCTGTACATGCACTGCACCATGACGGTGGCAGAACATGTGACTCCAGGCACCAAATCCTGCACCTACAACAGAAAGGCTAAAAGGTGGGAGGAGCTGTATGGAAACCatgctgtgtgcgtgtgctgtgACTCCAGGTGTGCTGCTGACCGGGCAGAAGATCAGAGGAGGAGCCTAGTGACAAGTCACCTGCTGCCCTTGGAGCATCACCGTGCTATTCCTTCCTCTGCGGATGGAAACCGTAGGTCTGGGGAAGAAGCCGTTCCAGGATTGGGGTCCCATACTGAAGGAGAGCGAAGGCAAGTGGCCCCTCGGCCAAAGGAGTCTGCAGCAGTCGACAGTCCGGCAGCGGTAGAGGTGGATTCCAGGGATGCTTATGACTCCGTGGCATCGGAGGACTATGCAGCTGAACTGTTTAAAGGTGAGGAGTTGTCGTGGGAGAGCTTTCATGATGAAGATGAGCGAGAAGAGCTCGCGAGAAAGGAGGCTGACTATGACTATGAACGGTTCCCAGTCTAATGGGATGGCTGGCAGGTCCCTGAGGAATTCCAGTGTCTGGTTGTTTCAATGAGGGGGGGAAATAAACCTTCAAAATGGTTGTGGGTCTCCTCTCTTTATTGCCAATTCAGTTCCCAGTCCTTTTGGAGGACTGTTGGGCTGCACCACAAGACACTGTGGCAGACCTGACATGATTGTGATCCCCTTGTAAAAGGGTTCAGCGGTTTCCTTCCAAGGCTTTATGGCATGAGCTGGGAGTCCAGTGCACTTAATGCAGGTGGAACACTATGCTCCACTTATTGTAACTTCTGGCATTATTCATGAGTTCAGATTTTCTACAGCTGCTTGTATAGCTTAGAGGTCCAGTCCTGTATTTTGGTGGCTTCTTATCAAAGCATCCCCTGTGGTGATTGTAGACTTGCAGGGTGGGTCATGTAAAATGGGGTTATAAGGCCCTGATGTTGAGGGAGTAGTATTGACTGACTTAGAGGCTTCTTGTATTGGGTGCTTTTAGGAAAGGGGATTTGTGTTGTGTCCAGCACTGTCCTTTAAAGGGTTCAGTGGTTTATTTTCTAGGCATTGTTTCATGAGCAGAGTCCAGTTAACTGGTTTTATGTGGGTGGAACTTTACTTTCAATAACCCACATAATGAGTCCTAAGTGGCTTATCTGTATTTGCATGTGGATCCACTTGTACAGCACTGGATTGAAAGTACCTCCGTTTAGTGTCCAAAGAAAGTCATCCTGTACAGTTAAGTAAACTTACTGACTGAGTGGAGCCATAGATGTGCTTGGAGAATAAGATGAAGGGTTTAATGAGACTAATTGATTGTAACTGGTGACCAgaagaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012304 True 2502 mRNA 0.50 10 15374349 15378863

Neighbor

gene id symbol gene type direction distance location
AMCG00012301 NA coding downstream 269213 15064129 ~ 15105136 (-)
AMCG00012299 NA coding downstream 323746 14964025 ~ 15050603 (-)
AMCG00012295 NA coding downstream 620340 14744315 ~ 14754009 (-)
AMCG00012297 NA coding downstream 674214 14698531 ~ 14700135 (-)
AMCG00012296 LOC107582906 coding downstream 680198 14691414 ~ 14694151 (-)
AMCG00012312 NA coding upstream 385156 15764019 ~ 15803519 (-)
AMCG00012311 NA coding upstream 485199 15864062 ~ 15874730 (-)
AMCG00012315 NA coding upstream 505247 15884110 ~ 15885623 (-)
AMCG00012314 NA coding upstream 516226 15895089 ~ 15907082 (-)
AMCG00012323 NA coding upstream 614900 15993763 ~ 16005231 (-)
G135864 NA non-coding downstream 554413 14818855 ~ 14819936 (-)
G135859 NA non-coding downstream 617320 14756522 ~ 14757029 (-)
G135851 NA non-coding downstream 682430 14673011 ~ 14691919 (-)
G135802 NA non-coding downstream 932247 14440765 ~ 14442102 (-)
G135799 NA non-coding downstream 938621 14434975 ~ 14435728 (-)
G135913 NA non-coding upstream 125554 15504417 ~ 15507652 (-)
G135973 NA non-coding upstream 431933 15810796 ~ 15811753 (-)
G135975 NA non-coding upstream 434257 15813120 ~ 15816171 (-)
G135987 NA non-coding upstream 541396 15920259 ~ 15941294 (-)
G136024 NA non-coding upstream 721946 16100809 ~ 16101090 (-)
G135857 NA other downstream 580191 14725510 ~ 14794158 (-)
G135856 NA other downstream 653179 14717472 ~ 14721170 (-)
AMCG00012291 NA other downstream 724022 14608810 ~ 14650327 (-)
AMCG00012292 NA other downstream 771508 14596158 ~ 14602841 (-)
AMCG00012281 NA other downstream 839909 14531455 ~ 14534440 (-)
G135957 NA other upstream 328071 15706934 ~ 15732134 (-)
G135988 NA other upstream 542741 15921604 ~ 15925153 (-)
G136070 NA other upstream 841263 16220126 ~ 16227243 (-)
G136125 NA other upstream 933858 16312721 ~ 16314393 (-)
AMCG00012340 NA other upstream 1036244 16415107 ~ 16432813 (-)

Expression


Co-expression Network