AMCG00012317


Basic Information

Item Value
gene id AMCG00012317
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 15987059 ~ 16057103 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012317
ATGAAGCGTGTGAGGTTGTCTCTGGCCGATGATACCACTGCGATTGAAGCCGTGGCTTTCGACATGGAAAAGGCTCGCTGCCTGAAGAAGGACAAATGGTTCCTTCTGGACAATTACAGGACAAGCAATTTCAGAGATCAGACATCCTTGGTGATAGGGGAGCGTACTGAGTTCTTCCTTGAGACTCGCCTCAAGCCGAGACACAGCTCTCCTGACAGCCGCCAAACCGAGGGTTCACTGAAAGCAGGACAGTCCGGCCCATCCTCCAGGAGTGGGGTCACTAAGCCCAGCACAGCGGCCCAGTCCCACTCTGTCCTCGGTACTGGGGAGAGTCCGGGCGCTGCTGTGGAAGACTTCACAGAGGAGGTGTTGGATGCTTTATACCAGCTGGACCGCACCTCTGAAAGCAGAGAGCAGCCAGGAGCCTCACACAGGGGCCCTCATAAGCGACCACCAGGGAGCAGTGCAGTGAATCTCTCTCAAGCGTTTCCCTGCCCTCAGTGCTCAGTATCCTTCACTGCCCAACTCTTCCTCCACAAGCACATCAAGAGGTCTCACCCTCAAGAGTACCTAACCATGATGAGGTCTGGCTCAGCTCAGCTGGGGAAGACTGAGGCAGAAGTGCAACAGAAGATCCAGGCCAGACTGAAGAAGGTGGAAGAGATCAGACAGGCGGTGGAGCTCAGCAGAAGTCTCTCAGACCTGCGCCCCCCTCCACACACCAAGGACTGGTCTGATGTCACTGTGACCTCTGACGTCTGTGTGGGGGCTGTCAGGAGAGCTGTCTCTCAGCTGGAGGAGAGACTCAGAGAAGAAATGCAAAAATTCTATGGAATTGAGCTGAAGAGGATCCAGCAATATGCAGGTATCTGCTACAAGAaacttaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaaccaTGGCTCAGACAAGAGCACAGCTTAAAACTGCATTTGTCTGCTGTCAGCTGTTACCATGTTTCAGGAGCAAACACTGCATCTGTGCCAAGACAGCTGAGAGACAGCTCTCCTGACAGCCCCCACACAGACGTCAGAGGTCACAGTGACATCAGACCAGTCCTTGGTGTGTGGAGGGGGGCGCAGGTGGTCCCAGGTGATGCCCAGCTCTTGGCCAAACTCCTCTCCATACCACACGAGCAGTTCGCAGCTTGCAATGATGGGTTTGCAGGACTTGTAGAAGATCTGATCACGACTGAACTGGGTGAACTGGGGAAGTGTTGGGTGAAGACATCACAGTTGGGTTCCATTATGAAATTCTTTGTTACTCACCACCCAGGAGTACCCACTCAGTACAGCCTTCTCCTCATTGGAAACCTCCCCCTCATAGGGCCCAAAGCGTACCCCTTTGGGGATCAGCTTGCCGTCGTTAAAGACCCCCAGTCCGGCCCCTGGGATACTGGAGTCCCGCACAGTCAGACCCCGAGGCAGAGTAAGCCGAGCCCTGTGTGTCGATCCCAGTTCGGCTGGGGTGTCTCTAATGTTGTACCCTCCCGTGTAGCAGTTTATCAGCAGGACCTGTTTCTGGAGCCAGTCTTTCATGAGATGCGGTGCAGCTGGTACATAGCATCCAACTCCTCCTCTGTGAAGTGTTCCATAGCTAAGCTGGGCTTAGTGACCCCACTACTGGAGGATGGGACGGACTGCCATGCTTTCTGTGGACCCTACACATGGAatTACCAGAGGAGGCGAGACAACATGAGCAACACGAAGAAGAGAGACTGCGCCAAGAAATGa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012317 True 1797 mRNA 0.53 15 15987059 16057103

Neighbor

gene id symbol gene type direction distance location
AMCG00012316 NA coding upstream 2670 15941632 ~ 15984389 (+)
AMCG00012313 NA coding upstream 90550 15888698 ~ 15896509 (+)
AMCG00012310 NA coding upstream 171345 15764029 ~ 15815714 (+)
AMCG00012307 NA coding upstream 456680 15523512 ~ 15530379 (+)
AMCG00012306 NA coding upstream 556172 15430288 ~ 15430887 (+)
AMCG00012321 NA coding downstream 750 16057853 ~ 16100861 (+)
AMCG00012320 LOC108256206,LOC107686994,LOC108411041,LOC107690275,LOC107729189 coding downstream 85547 16142650 ~ 16155119 (+)
AMCG00012319 NA coding downstream 107165 16164268 ~ 16169716 (+)
AMCG00012325 NA coding downstream 141900 16199003 ~ 16210644 (+)
AMCG00012327 eif3c,LOC106904143,LOC100304733,LOC102226018,LOC105917567 coding downstream 155810 16212913 ~ 16226772 (+)
G135779 NA non-coding upstream 86438 15879134 ~ 15900621 (+)
G135768 NA non-coding upstream 174938 15811913 ~ 15812121 (+)
G135666 NA non-coding upstream 180406 15802429 ~ 15806653 (+)
G135721 NA non-coding upstream 629334 15351885 ~ 15357725 (+)
G135657 NA non-coding upstream 1168334 14811738 ~ 14818725 (+)
G136025 NA non-coding downstream 45791 16102894 ~ 16103304 (+)
G136040 NA non-coding downstream 114636 16171739 ~ 16172095 (+)
G136051 NA non-coding downstream 136872 16193975 ~ 16196114 (+)
G136177 NA non-coding downstream 480959 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 508796 16565899 ~ 16566231 (+)
G135781 NA other upstream 56211 15911248 ~ 15930848 (+)
AMCG00012309 NA other upstream 178538 15166544 ~ 15808521 (+)
AMCG00012324 NA other downstream 47802 16104905 ~ 16142641 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other downstream 119293 16176396 ~ 16183090 (+)
G136076 NA other downstream 193145 16250248 ~ 16259332 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other downstream 336596 16393699 ~ 16432813 (+)
AMCG00012348 NA other downstream 503546 16560649 ~ 16648562 (+)

Expression


Co-expression Network