AMCG00012326


Basic Information

Item Value
gene id AMCG00012326
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16287877 ~ 16288823 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012326
AGATAGCGAGATGGAGGAGGATGTGCCAGAGGAGGAGGGTGAGGGcaaggaggaggagcaggagagagagagggaggaagaggggcaACAAGAGGATGAGGAGGAGTGGGGGATGCCCTGCAGTGACGAGGAGATCGAGGACCCCGCCTCCTGGATGCCCCCTCCCTCGGAGATCAAACGTCTGTATGACCTGCTGGACCAGGGAGGGGTCCTGGAGCTGTGTCTGGTCCCCCTGCCCCGCCGGCCCCCCACACCTGACACACAGTCCTCCACCGACAGAGACAGCGCCGACTccgaggaggagagagagaggagggagagggaggacagggagagagactacaaGGCCGAGCCCTCGGGCCCCGCCCCCACGCCCATTCCCCCCGCCTCCCCCTCGTCACAGAGAGCCGACCCCAAAGACATCTTCTCCCCCCGCCAGCGCCGCTACTGA

Function

GO:

id name namespace
GO:0007420 brain development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012326 True 451 mRNA 0.66 2 16287877 16288823

Neighbor

gene id symbol gene type direction distance location
AMCG00012327 eif3c,LOC106904143,LOC100304733,LOC102226018,LOC105917567 coding upstream 61105 16212913 ~ 16226772 (+)
AMCG00012325 NA coding upstream 77233 16199003 ~ 16210644 (+)
AMCG00012319 NA coding upstream 118161 16164268 ~ 16169716 (+)
AMCG00012320 LOC108256206,LOC107686994,LOC108411041,LOC107690275,LOC107729189 coding upstream 132758 16142650 ~ 16155119 (+)
AMCG00012321 NA coding upstream 187016 16057853 ~ 16100861 (+)
AMCG00012330 NA coding downstream 3448 16292271 ~ 16300821 (+)
AMCG00012332 NA coding downstream 18586 16307409 ~ 16316260 (+)
AMCG00012331 NA coding downstream 58253 16347076 ~ 16353476 (+)
AMCG00012341 NA coding downstream 75688 16364511 ~ 16364896 (+)
AMCG00012337 NA coding downstream 78606 16367429 ~ 16378987 (+)
G136051 NA non-coding upstream 91763 16193975 ~ 16196114 (+)
G136040 NA non-coding upstream 115782 16171739 ~ 16172095 (+)
G136025 NA non-coding upstream 184573 16102894 ~ 16103304 (+)
G135779 NA non-coding upstream 387256 15879134 ~ 15900621 (+)
G135768 NA non-coding upstream 475756 15811913 ~ 15812121 (+)
G136177 NA non-coding downstream 249239 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 277076 16565899 ~ 16566231 (+)
G136195 NA non-coding downstream 331432 16620255 ~ 16632264 (+)
G136236 NA non-coding downstream 540227 16829050 ~ 16831802 (+)
G136237 NA non-coding downstream 553744 16842567 ~ 16907105 (+)
G136076 NA other upstream 28545 16250248 ~ 16259332 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other upstream 104787 16176396 ~ 16183090 (+)
AMCG00012324 NA other upstream 145236 16104905 ~ 16142641 (+)
G135781 NA other upstream 357029 15911248 ~ 15930848 (+)
AMCG00012308 NA other upstream 598539 15684478 ~ 15689338 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other downstream 104876 16393699 ~ 16432813 (+)
AMCG00012348 NA other downstream 271826 16560649 ~ 16648562 (+)
AMCG00012349 LOC106588560,LOC106570198 other downstream 385456 16674279 ~ 16706193 (+)
AMCG00012351 NA other downstream 444603 16733426 ~ 16765108 (+)
G136245 NA other downstream 522883 16811706 ~ 16863593 (+)

Expression


Co-expression Network