AMCG00012331


Basic Information

Item Value
gene id AMCG00012331
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16347076 ~ 16353476 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012331
AGTGACATGAAGTGGCTGATTTCCATCACGGTGTACCTGTTGGCAGCTGATGGTGTTTCAAACTcttctttcactctctctctctttctgattACAGAGCTGGGCCGCTCCACAGCATTTAACCTGGAGACAGAGAACTTCACAAAGTTTGATGGCGACAGTGAATGGTTCGGATACAATGTAAGACAGATGGACagtggaaatggaaaatgGGTCATTGTCAGTGCTCCTCTGCAAGGAAACGGAAGCCTCTTCAGATGTTCCTACAACTCTTCGTCTTGTTCCCGCATTACTGTGCCAGGTATACGGTGTTCTTGGATGTGTCAGTGGAAATTGGGGTTGAGTTTGCCGAGTCCACCACAaagtgcAGTAGGTCCCTGGTCAATGGGTCTGGCATTGACTACTAATCCATCCACCCAAGAGCTTGTGGTGTGTGGGCCCAGGTTGCAACATCCCTGTGGGAAGAACACATACTTGAATGGCATTTGTTTCAAACTAAACAGGACCTTCATGCCTCTGCCTGGAAACTACTCTCCTGGGTACCAAGAGTGCCCCCCTAAGAACATCGACATCGTGTTCCTGATTGACGGCTCGGGCAGCATAAGTTCAGGCGATTTCAGCAAGATGAAGACCTTCATGATACAAATCATCAAGAACTTCCACCAGAAAAGAGCCAACTTTGCGGTGGTTCAGTTTTCCTCTTATACAGAGGTGGAGTTTAACTTCAACACTTACCTGGCAACCAGCAATATAGAAATCCTCATTAACAATATAGTACAGAAACAACAATTTACATATACAGCAAAAGCCATTCAGTTTGTGGCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012331 True 828 mRNA 0.46 7 16347076 16353476

Neighbor

gene id symbol gene type direction distance location
AMCG00012332 NA coding upstream 30816 16307409 ~ 16316260 (+)
AMCG00012330 NA coding upstream 46255 16292271 ~ 16300821 (+)
AMCG00012326 NA coding upstream 58253 16287877 ~ 16288823 (+)
AMCG00012327 eif3c,LOC106904143,LOC100304733,LOC102226018,LOC105917567 coding upstream 120304 16212913 ~ 16226772 (+)
AMCG00012325 NA coding upstream 136432 16199003 ~ 16210644 (+)
AMCG00012341 NA coding downstream 11035 16364511 ~ 16364896 (+)
AMCG00012337 NA coding downstream 13953 16367429 ~ 16378987 (+)
AMCG00012336 NA coding downstream 47014 16400490 ~ 16402197 (+)
AMCG00012342 NA coding downstream 160383 16513859 ~ 16517621 (+)
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding downstream 177277 16530753 ~ 16537245 (+)
G136051 NA non-coding upstream 150962 16193975 ~ 16196114 (+)
G136040 NA non-coding upstream 174981 16171739 ~ 16172095 (+)
G136025 NA non-coding upstream 243772 16102894 ~ 16103304 (+)
G135779 NA non-coding upstream 446455 15879134 ~ 15900621 (+)
G135768 NA non-coding upstream 534955 15811913 ~ 15812121 (+)
G136177 NA non-coding downstream 184586 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 212423 16565899 ~ 16566231 (+)
G136195 NA non-coding downstream 266779 16620255 ~ 16632264 (+)
G136236 NA non-coding downstream 475574 16829050 ~ 16831802 (+)
G136237 NA non-coding downstream 489091 16842567 ~ 16907105 (+)
G136076 NA other upstream 87744 16250248 ~ 16259332 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other upstream 163986 16176396 ~ 16183090 (+)
AMCG00012324 NA other upstream 204435 16104905 ~ 16142641 (+)
G135781 NA other upstream 416228 15911248 ~ 15930848 (+)
AMCG00012308 NA other upstream 657738 15684478 ~ 15689338 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other downstream 40223 16393699 ~ 16432813 (+)
AMCG00012348 NA other downstream 207173 16560649 ~ 16648562 (+)
AMCG00012349 LOC106588560,LOC106570198 other downstream 320803 16674279 ~ 16706193 (+)
AMCG00012351 NA other downstream 379950 16733426 ~ 16765108 (+)
G136245 NA other downstream 458230 16811706 ~ 16863593 (+)

Expression


Co-expression Network