AMCG00012332


Basic Information

Item Value
gene id AMCG00012332
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16307409 ~ 16316260 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012332
ATGTCTGTGTTCTGGTCTCGCTCCCGGCTGCGTGACCTCCTGTCCCTCCGGCTCCTGAGAACGGCGGCTCCCAGAACCCTGAGCGGCGGCACGACAGTGACCCCGCAGCCCCTCCAGCGAACCCCCGAGACCCTGAGCTTCGACGAGGCCGGAGCTTTCGAAGTCAAGAGTCTGGGGGAGCTGCTGCGTGCCCTTGGCGTATTCAGAGCATGCTCCATCCCCCCCCTCGTCAACCACAGCAGCACGCTGCTGtcgctctctcgctccctcctGGGCGCCCGTCTCTTCTCTCGGCTCATGAGGGCCACAGTGTACGCCCAGTTTGTGGCAGGGGAAACGGAGGAGGAGATCCGCGCCGCTATGGAGAAGATGAGTGCGCTGGGCCTGCGGCCGATGCTGGCTGTGCCCATCGAGGAGGACCTGGGAGAGAGCAAGCCAGGAGAGCAGCGCTACGATGATAACCTGGTGGCCATGCTGGAGTGTagGAAGGtgtcctctctcctctctctctcagaggaaCAGTTCAATCTCAATGCCCTGGTCAGCGTGATGGAGGGACAGGAAGTCAATTTTCCTGGACTGACTGAGAGTGAGACACAACATTTCCGGTGTGGCCTGGAGCGCCTGAGCAAAGTGGGagagTGCGCCCGCTCTCTCAGGGTCCGGGTTCTGGTTGACGCCGAATACACCTACATCAACCCCGCCCTCACCCTCGTCACAATGGCAATGATGAAGAAGTTCAACCAGTCGGAGCCCTGGATTTGGAACACCTACCAGTGTTACTTGAAGTCCGTGCCGTACGGCTCTGTGGACGACACCGTGCCCTACCTGGTGCGGCGAGCGCAGGAGAACCGCACCGTCCTGCAGGGCATCCGCAAGGAGAGAGATCTCCTAAGAAAGGAGCTGTGGAGGAGACTGctgaggaggagatga

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012332 True 933 mRNA 0.61 7 16307409 16316260

Neighbor

gene id symbol gene type direction distance location
AMCG00012330 NA coding upstream 6588 16292271 ~ 16300821 (+)
AMCG00012326 NA coding upstream 18586 16287877 ~ 16288823 (+)
AMCG00012327 eif3c,LOC106904143,LOC100304733,LOC102226018,LOC105917567 coding upstream 80637 16212913 ~ 16226772 (+)
AMCG00012325 NA coding upstream 96765 16199003 ~ 16210644 (+)
AMCG00012319 NA coding upstream 137693 16164268 ~ 16169716 (+)
AMCG00012331 NA coding downstream 30816 16347076 ~ 16353476 (+)
AMCG00012341 NA coding downstream 48251 16364511 ~ 16364896 (+)
AMCG00012337 NA coding downstream 51169 16367429 ~ 16378987 (+)
AMCG00012336 NA coding downstream 84230 16400490 ~ 16402197 (+)
AMCG00012342 NA coding downstream 197599 16513859 ~ 16517621 (+)
G136051 NA non-coding upstream 111295 16193975 ~ 16196114 (+)
G136040 NA non-coding upstream 135314 16171739 ~ 16172095 (+)
G136025 NA non-coding upstream 204105 16102894 ~ 16103304 (+)
G135779 NA non-coding upstream 406788 15879134 ~ 15900621 (+)
G135768 NA non-coding upstream 495288 15811913 ~ 15812121 (+)
G136177 NA non-coding downstream 221802 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 249639 16565899 ~ 16566231 (+)
G136195 NA non-coding downstream 303995 16620255 ~ 16632264 (+)
G136236 NA non-coding downstream 512790 16829050 ~ 16831802 (+)
G136237 NA non-coding downstream 526307 16842567 ~ 16907105 (+)
G136076 NA other upstream 48077 16250248 ~ 16259332 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other upstream 124319 16176396 ~ 16183090 (+)
AMCG00012324 NA other upstream 164768 16104905 ~ 16142641 (+)
G135781 NA other upstream 376561 15911248 ~ 15930848 (+)
AMCG00012308 NA other upstream 618071 15684478 ~ 15689338 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other downstream 77439 16393699 ~ 16432813 (+)
AMCG00012348 NA other downstream 244389 16560649 ~ 16648562 (+)
AMCG00012349 LOC106588560,LOC106570198 other downstream 358019 16674279 ~ 16706193 (+)
AMCG00012351 NA other downstream 417166 16733426 ~ 16765108 (+)
G136245 NA other downstream 495446 16811706 ~ 16863593 (+)

Expression


Co-expression Network