AMCG00012333


Basic Information

Item Value
gene id AMCG00012333
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16327201 ~ 16333505 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012333
GTTACGTTGTTCGTAAGTGTGTGTTTCGACTGGTATGTTGCAGCTGTCTGCTGCCGGGCCCGGGCCGATCCGCATCGCACTGACACTACTGGGGATCCCCTACGGGCTGTGCTCGGCGAGTAAAGGtgcTCCCAGTTGTCCCTTAGTAAAAGCCACCCTTTCTCTTGCCCAGTCTGCGCACACTGGTCCTCCGTTTGTCTGTCGTTCCGGTCTGCACACGATGTCTCCCCCTTCTCTACCTCCCCATGTGAAGGCCAGGTGCGCTCTGTATccggggtcagaggtcaagcGCCTGCCCGTGCCCGATGAGAGAGTGAGCTGGGAGAGCAGTTGGCCGGAGTACAGCCCCCCCACCTACACAGCCCCCGCCGTCCTCAAACAACCCGTCTGGGCCGACCCGGACATTGGgtggCGGAGGGATAGTTCGGGGGAGAAGGTGGTGAGCCCCCGCTCGGGGCTGCCGGTGCTGCAGTTCGTCTCCATCAAGCGCAAGGACTGTGGAGAGTGGGCCATCCCCGGGGGCATGGTGGACGCCGGAGAGCTCGTGTCTCTCACTCTGCAGAGGGAGTTTTCCGAGGAGGCGCTCAACTCCCTGGACACGCCCCCCCAGGAGCGAGAGAGGCTCAGCCAGCGGATCACAGAGCTCTTCACCAACCCCAGCCTGCAGATATATAAGGGCTATGTTGACGACCCTAGAAACACAGATAACGCCTGGATGGAAACAGTCGCGGTCAACTTCCACGATGACACAGGGAACAGTGTGAGTGAACTCCCCCTCCAAGCAGGGGACGACGCCGGGCAGGTGAGCTGGGTGGATGTGGACTCTGCCCTCCAGCTATACGCCAGCCACGCCCTCTTCCTGGAGAGCACGGCCCGGCAGCACCACGCCCACTGGGCCTGAGACCCACCTGACCCACCCTGCCGATCCATCCCGTCTTTCATCCCACCAGACTGGGTGACATTGTCCATCTGACCTGATGTCATCTCAGCCATAAATGTTGCTAATGTCTTTATCCAGTATATCCCCTTTAATCTCAACTTGGGCTACACCAAAACATACAGATTATAGGAggtaaaataaagcatttaagttaaattaattgttttctctcAGTATGTTTTGCAAAACTTTATACTGAACAACAACACCAAGTTTATATTcaatattcttttaaaaaagaGATGACAACTGCCAGCTTTCATGAATCGTCACATTTACAGGTCAAACAGACTAGAAATACGATATCTCTACGGAatctgtttcatttatttatttatttgtgtattcatTCAATGACTCGTTGACTCAGGTACAGATCagtaaattaaatcactttGTGAACTCAAACCTTATAACTCAAACTGTCGGCTCCACCAAACCAAAGTTACGACAGCAGGAAAGTAGATATGAAAGCTTTCCTGTGACCAAATCCAAAGAATTAAAGACCTGTAAAATATCCCGGCAGCAAAACAAGGTTGAAGAATGCCCATTTTCCCTACATTGGTAGGAGAAGGGGAGTGGTATCACAAATATATCACAAATTTGGAAATAAGCATTAAAACCTAAACATAAGAAGTTAACAATTCTAATAGTTGCAAAAGCCCATGTTAAATTCTGAAGGCGTTTCCTTAACATCTTATATCAATGAAGTACACAAAACAATAAGTAacagtagaaaaataaacataggaaaaataaaatgggattaAACACTGTAACATAATTTTGTTGCTGGTAAaaacatctatatataaattaaaacaatacatagaaCATGCTTGTAACTGTATATAAGTGTGATAGTAAGTGAATCattacagtaaaatgaaaaccaaatagAACTAATACATtggttgtacatttttttaattttattatacaaaacaaatcagctgCATCCAATTGTGTAGCAACGTGGTCATTAACAACAACTTGCAGTATGATATGATTCAAGTTTAATAAGATTATGTGTGAAGTAGGTCAGGATAGCTTTCCAATATTTGCGCTTTGTACAGTTTGGCTAATAAGgtatatcaaattatatttatttgtggttaaacatatttttcacgCTCTTCCAAGGCTTTGGATAAGTCTTAGACGAATACAACACACCAGCAAGATCTATGATAACATAAAcgaacacattattttattttaaatcaggtttcaatattattttctaaatattactTATTTCTATAAGTATTTATTCTGACTACTAGTGATGTAGGGAATGTGGAAAAGTAATAGGTGGAACTGAGAGAAAAACACTAAAGATTGATGGAATCTCTGGCTTTCTaattattgcttattttttggCTGGTTTTCACCCcctgtaaaagtaaaaaatatcaGGTGCCGATTGGTGACcaagccttttttatttatctcaCCATTGCCCCTTTCATTTGGCTTTGGCTGGAAGGAGAGGTTTTGTTTAGTAGGACGAATTGGAAGTTTTGAATTTTTAACCtgctgccttttgtttttgcagtaagtgttttgatttggtccccTGTGTCAGGTATCTTATTTTCTGTGTCCTTaggtttatatttataactaTATAACGTGATGTGTTGATTATACTATTATTTGACAAATCAATTGAATTCATGTAGCTTGATTGATACTTTGAGGTTTGAGATTTAAAGCCAAGTGAGATTGCCATTCAGCTtcttccattcatatttgtccATAATTGTTCCTGGTAATTGGAAGTTAGTTTTTTCCAAATTATCTTTAAGAACTGTTAGAACAACCTAATCACTGGATAGCAGTATTTATAGCATAATTTGTAAACAACACAAGGGCTTACCTTTAAGAAATGCTCGATTCATTTGTGCTTTGCTTTAACATGATCTTTAAGAGTTAAGAGTCcaaatcatgcattttgttGATGTCAGAGCTTCTCCAACATGGTAATATCGAGAATACACAATACAATTCTTTGAACTACCTCAAGTCTTGGCGAAAGCATAATTGAAAATTCTGTGTTCCTCATGCTGTAATGTCACTGCAGACACAGAAGATGGTTGACATTGTAGTCCAGATGCaaagatgaaagaaaaacaacagagaattacagtaaacaaataaaaaaaataaagcaatatatatttcaattaataactTCACTAATAGGTGTCAAGTTTGTCTGCATTGGTTGACATCCAATCTTTACATCCACAATT

Function

GO: NA

KEGG:

id description
K13988 NUDT9; ADP-ribose pyrophosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012333 True 3198 mRNA 0.41 6 16327201 16333505

Neighbor

gene id symbol gene type direction distance location
AMCG00012334 NA coding downstream 4601 16318635 ~ 16322600 (-)
AMCG00012329 NA coding downstream 71723 16255275 ~ 16255478 (-)
AMCG00012328 NA coding downstream 139691 16184399 ~ 16187510 (-)
AMCG00012322 NA coding downstream 272983 16049454 ~ 16054218 (-)
AMCG00012323 NA coding downstream 321970 15993763 ~ 16005231 (-)
AMCG00012335 NA coding upstream 22005 16355510 ~ 16361869 (-)
AMCG00012339 ppp4c,ppp4cb,LOC105024361 coding upstream 103291 16436796 ~ 16440071 (-)
AMCG00012345 NA coding upstream 112894 16446399 ~ 16476202 (-)
AMCG00012346 NA coding upstream 148445 16481950 ~ 16494681 (-)
AMCG00012344 NA coding upstream 162284 16495789 ~ 16510609 (-)
G136112 NA non-coding downstream 35743 16282449 ~ 16291458 (-)
G136066 LOC102198857,LOC106578327 non-coding downstream 110130 16215401 ~ 16217071 (-)
G136041 NA non-coding downstream 155113 16171759 ~ 16172088 (-)
G136029 NA non-coding downstream 166003 16127696 ~ 16161198 (-)
G136024 NA non-coding downstream 226111 16100809 ~ 16101090 (-)
G136172 NA non-coding upstream 186381 16519886 ~ 16522448 (-)
G136175 aldoa,LOC108249121,LOC103373891,LOC107713203,LOC107581922,LOC107661747 non-coding upstream 193012 16526517 ~ 16537271 (-)
G136186 NA non-coding upstream 218525 16552030 ~ 16552281 (-)
G136203 NA non-coding upstream 308858 16642363 ~ 16642613 (-)
G136224 NA non-coding upstream 366484 16699989 ~ 16700204 (-)
G136125 NA other downstream 12808 16312721 ~ 16314393 (-)
G136070 NA other downstream 99958 16220126 ~ 16227243 (-)
G135988 NA other downstream 402048 15921604 ~ 15925153 (-)
G135957 NA other downstream 595067 15706934 ~ 15732134 (-)
G135857 NA other downstream 1533043 14725510 ~ 14794158 (-)
AMCG00012340 NA other upstream 81602 16415107 ~ 16432813 (-)
G136222 NA other upstream 365137 16698642 ~ 16699110 (-)
G136223 LOC105892008 other upstream 365970 16699475 ~ 16699791 (-)
AMCG00012365 NA other upstream 577987 16911492 ~ 16914685 (-)
AMCG00012372 tpm3,LOC106570192 other upstream 731051 17064556 ~ 17098725 (-)

Expression


Co-expression Network