AMCG00012336


Basic Information

Item Value
gene id AMCG00012336
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16400490 ~ 16402197 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012336
ACATGCGGACCCAGATTGGAACACGAGTGTGGAAAGAATATGTACCTCAATGGTGTCTGTTTCAAACTGGACCGCAACTTCGCTGCCTCATCTGGGAACTACACTCCCGGGTACCAAGAGTGTCCCTTTCAGGACATTGACATTGTGTTCCTGATTGACGGCTCGGGCAGTGTAGCTGGTAATGATTTCGCCAGGATGAAGACCTTCATGATCGAGATCATCAGGAAGTTCAGCCAGAGGGGAGCCAACtttgctGTGGTTCAATATTCCTACTCCGCGCGAACGGAGTTTGACTTTAGTCAGTACATATCGACCCCCGATAAAGAAGGCGTTATCaaccaaatatttcaaagaGGAGGAGGGACCAAGACTGCAGCGGGGATCCTCTATGTGGCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012336 True 399 mRNA 0.50 3 16400490 16402197

Neighbor

gene id symbol gene type direction distance location
AMCG00012337 NA coding upstream 21503 16367429 ~ 16378987 (+)
AMCG00012341 NA coding upstream 35594 16364511 ~ 16364896 (+)
AMCG00012331 NA coding upstream 47014 16347076 ~ 16353476 (+)
AMCG00012332 NA coding upstream 84230 16307409 ~ 16316260 (+)
AMCG00012330 NA coding upstream 99669 16292271 ~ 16300821 (+)
AMCG00012342 NA coding downstream 111662 16513859 ~ 16517621 (+)
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding downstream 128556 16530753 ~ 16537245 (+)
AMCG00012347 NA coding downstream 248136 16650333 ~ 16670699 (+)
AMCG00012350 NA coding downstream 311149 16713346 ~ 16715975 (+)
AMCG00012354 mex3a,mex3b,LOC107756899,LOC107671389,LOC107671388 coding downstream 410588 16812785 ~ 16818439 (+)
G136051 NA non-coding upstream 204376 16193975 ~ 16196114 (+)
G136040 NA non-coding upstream 228395 16171739 ~ 16172095 (+)
G136025 NA non-coding upstream 297186 16102894 ~ 16103304 (+)
G135779 NA non-coding upstream 499869 15879134 ~ 15900621 (+)
G135768 NA non-coding upstream 588369 15811913 ~ 15812121 (+)
G136177 NA non-coding downstream 135865 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 163702 16565899 ~ 16566231 (+)
G136195 NA non-coding downstream 218058 16620255 ~ 16632264 (+)
G136236 NA non-coding downstream 426853 16829050 ~ 16831802 (+)
G136237 NA non-coding downstream 440370 16842567 ~ 16907105 (+)
G136076 NA other upstream 141158 16250248 ~ 16259332 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other upstream 217400 16176396 ~ 16183090 (+)
AMCG00012324 NA other upstream 257849 16104905 ~ 16142641 (+)
G135781 NA other upstream 469642 15911248 ~ 15930848 (+)
AMCG00012308 NA other upstream 711152 15684478 ~ 15689338 (+)
AMCG00012348 NA other downstream 158452 16560649 ~ 16648562 (+)
AMCG00012349 LOC106588560,LOC106570198 other downstream 272082 16674279 ~ 16706193 (+)
AMCG00012351 NA other downstream 331229 16733426 ~ 16765108 (+)
G136245 NA other downstream 409509 16811706 ~ 16863593 (+)
G136255 NA other downstream 464340 16866537 ~ 16867448 (+)

Expression


Co-expression Network