AMCG00012337


Basic Information

Item Value
gene id AMCG00012337
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16367429 ~ 16378987 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012337
gGTATCTGAGGTGCAGGTCGGTATCTCTCCAGTGCTGAACCTGAATGTGTCCATCGAGAACGCCGGAGAGGATTCCTACAACACCCGCATCATCTTTACCTTCCCTAACGCCCTGTCCTACCGCCGATCCACCCTGCTGCAGTGGGACAGGGTggccacagtgcagtgtgatgtCACAGGCAGCAACTGCCTCATCAACAGGCCCATCTTCAAGAGCCAGGCCAAGGTTTTGTTTATCACCACATTTGATGTTGATGCCAGCAGTAAGCTGGACAGAGTGGTTACCTTGTCTGCTAATGCCACCAGGGCTGATGAATCTACCAACTATATCAATTTCACAGCGGGGCGCAATGATCTTCAAAAGCCTGTCTCTCACATACTCCAGGTCCTGAATCTGGGAATTAGGTACATCCCAGTGAACGTGACCATTCGAGTGCCAGTGAAGCTGGGAAACACGGATATCTGGAGCAACTCCTCAGGATTAAAGGACtgcagtgtggcagtgtgtaAAGTATTTTCCTGTACGATTTCTACCCTATCCTCTCCCATCATCACCTACAATCTCACTGGTGAGGTCAGCTCAGCCTGGATACAGCAGCAGTATATCCACATCTTCACAACGGCCCAAGATCGCTACATCAACACTGAGGTGGAAACCCGGGTGAATGTCTATGTAGAGTACGACTACAAGAAGGAAATCATTGGGGGAGTGGTGGGGGGGCTGGTGCTGCTGGCCCTCATCACACTGGGACTGTACAAGGCTGGCTTCTTCAAGAGAGGATACAAAGAGCTGCTGAAGGAGGCCAAAACAGAGGGGCAGAATGCCACACCTGGGGAGGAGAGTGCCCTCCCTGTGCAGGAGTAGAGTCTGAAACAAGGATGACACAACCGCTGACTTGGCAATACCCTGTGGGGgataaatatagaaatcctatcctgcctttgtccttggtgtgctgttactcctaacttcgttatcagcagctcacactCCTTTCTTTcaacgtattatctgcaaattacattCCCATGCAACTGGCAAttcagaggttaatgattattattcatgagtaatgattataatattgatgagatgggaaggcttagtttagaatgctaatcaaatcactgctatagttaTACCCACCctagtgtttgtattttatcagtTGCTACAAATTGTATCATGACAGAAGTGTTCctttattgcacttttaatacaaatatattgacaTTTCTCAATGTTCTACATGATCATATGAAATTAAAcggttttcttttgtgtttaagACTTCGGCATATAATTAGCAATTAGCACACAAAGGGCATATGCCATATATTAAAGCTTTAACTTGAAATAATATCAGATGTATTTAAAAGGAGATATATTTAGCAATTAGCCAGTACCATTTATGTTTAGttgaaaaatgtgtattctCCTGTTCAGTTACTCAACACACATGTAAAGCTGGCATCCTGAAACAGCAGCCTTATTCTAAACTGCCACCTGGAAACTATGAATGCATAGAAAGCAAATACCCTTAGCTTCTGCAATTCACAAAGAATAAATCaatctttaaatacatatttttgttgttctctgTCAAACAGACATTCAAGTACTTTTCTGAAAAGGGGATTTGCAATTACATTCCCACTTGCTCTCTAGCTTTCAAAGGTTTAGACGATATCCATAGGGTGACAGCTTTGCCACCTTTGCAAACTGAAACGTCTTCACAAAAATCTGAGTTTGTTAACAGAACCAAGTTGTGTCCTAATTAGGTGGGTGTGCCCTTCGGCCTCCAATGCAACACTCCTATAATGCCTAAAGGTTTAAAAGGTGCTCAATGTGTACATATGCAAGATTCTTCACAGGGTTTATCCCTTTTCATCCCTAAGCATGCAATTTCTTGGTTCTTGCCATTCACATGTAATACTTATTGAAAATACTTATTGAatatatgttaaatacataATCTGCTGTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012337 True 1987 mRNA 0.43 9 16367429 16378987

Neighbor

gene id symbol gene type direction distance location
AMCG00012341 NA coding upstream 2533 16364511 ~ 16364896 (+)
AMCG00012331 NA coding upstream 13953 16347076 ~ 16353476 (+)
AMCG00012332 NA coding upstream 51169 16307409 ~ 16316260 (+)
AMCG00012330 NA coding upstream 66608 16292271 ~ 16300821 (+)
AMCG00012326 NA coding upstream 78606 16287877 ~ 16288823 (+)
AMCG00012336 NA coding downstream 21503 16400490 ~ 16402197 (+)
AMCG00012342 NA coding downstream 134872 16513859 ~ 16517621 (+)
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding downstream 151766 16530753 ~ 16537245 (+)
AMCG00012347 NA coding downstream 271346 16650333 ~ 16670699 (+)
AMCG00012350 NA coding downstream 334359 16713346 ~ 16715975 (+)
G136051 NA non-coding upstream 171315 16193975 ~ 16196114 (+)
G136040 NA non-coding upstream 195334 16171739 ~ 16172095 (+)
G136025 NA non-coding upstream 264125 16102894 ~ 16103304 (+)
G135779 NA non-coding upstream 466808 15879134 ~ 15900621 (+)
G135768 NA non-coding upstream 555308 15811913 ~ 15812121 (+)
G136177 NA non-coding downstream 159075 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 186912 16565899 ~ 16566231 (+)
G136195 NA non-coding downstream 241268 16620255 ~ 16632264 (+)
G136236 NA non-coding downstream 450063 16829050 ~ 16831802 (+)
G136237 NA non-coding downstream 463580 16842567 ~ 16907105 (+)
G136076 NA other upstream 108097 16250248 ~ 16259332 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other upstream 184339 16176396 ~ 16183090 (+)
AMCG00012324 NA other upstream 224788 16104905 ~ 16142641 (+)
G135781 NA other upstream 436581 15911248 ~ 15930848 (+)
AMCG00012308 NA other upstream 678091 15684478 ~ 15689338 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other downstream 14712 16393699 ~ 16432813 (+)
AMCG00012348 NA other downstream 181662 16560649 ~ 16648562 (+)
AMCG00012349 LOC106588560,LOC106570198 other downstream 295292 16674279 ~ 16706193 (+)
AMCG00012351 NA other downstream 354439 16733426 ~ 16765108 (+)
G136245 NA other downstream 432719 16811706 ~ 16863593 (+)

Expression


Co-expression Network