AMCG00012341


Basic Information

Item Value
gene id AMCG00012341
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16364511 ~ 16364896 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012341
TCCAGACCAGTGCTCAGGGTTGAGCCCACTGTGTCTTTCGATCCACCTATAATCAGTCTGGATAATAAGAACTGCCAGAGTTTCAAGAACTTCACAGCGACGGTCTGCTTTCCTGTGTCCAAAGCCACCAAGGACAATATCGCTGATCTTCAGGTGAACATTAGCTACACCTTCACACTGGATGCCACACGCTCCGTATACCGGGCCTACTTTTCCACGGGGAACCGAATGATCAACAACACCATCACTGCCAGAGTGGAAGTCAAATGTGTCAAGCACCAGTTCAAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012341 True 291 mRNA 0.49 2 16364511 16364896

Neighbor

gene id symbol gene type direction distance location
AMCG00012331 NA coding upstream 11035 16347076 ~ 16353476 (+)
AMCG00012332 NA coding upstream 48251 16307409 ~ 16316260 (+)
AMCG00012330 NA coding upstream 63690 16292271 ~ 16300821 (+)
AMCG00012326 NA coding upstream 75688 16287877 ~ 16288823 (+)
AMCG00012327 eif3c,LOC106904143,LOC100304733,LOC102226018,LOC105917567 coding upstream 137739 16212913 ~ 16226772 (+)
AMCG00012337 NA coding downstream 2533 16367429 ~ 16378987 (+)
AMCG00012336 NA coding downstream 35594 16400490 ~ 16402197 (+)
AMCG00012342 NA coding downstream 148963 16513859 ~ 16517621 (+)
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding downstream 165857 16530753 ~ 16537245 (+)
AMCG00012347 NA coding downstream 285437 16650333 ~ 16670699 (+)
G136051 NA non-coding upstream 168397 16193975 ~ 16196114 (+)
G136040 NA non-coding upstream 192416 16171739 ~ 16172095 (+)
G136025 NA non-coding upstream 261207 16102894 ~ 16103304 (+)
G135779 NA non-coding upstream 463890 15879134 ~ 15900621 (+)
G135768 NA non-coding upstream 552390 15811913 ~ 15812121 (+)
G136177 NA non-coding downstream 173166 16538062 ~ 16539149 (+)
G136191 NA non-coding downstream 201003 16565899 ~ 16566231 (+)
G136195 NA non-coding downstream 255359 16620255 ~ 16632264 (+)
G136236 NA non-coding downstream 464154 16829050 ~ 16831802 (+)
G136237 NA non-coding downstream 477671 16842567 ~ 16907105 (+)
G136076 NA other upstream 105179 16250248 ~ 16259332 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other upstream 181421 16176396 ~ 16183090 (+)
AMCG00012324 NA other upstream 221870 16104905 ~ 16142641 (+)
G135781 NA other upstream 433663 15911248 ~ 15930848 (+)
AMCG00012308 NA other upstream 675173 15684478 ~ 15689338 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other downstream 28803 16393699 ~ 16432813 (+)
AMCG00012348 NA other downstream 195753 16560649 ~ 16648562 (+)
AMCG00012349 LOC106588560,LOC106570198 other downstream 309383 16674279 ~ 16706193 (+)
AMCG00012351 NA other downstream 368530 16733426 ~ 16765108 (+)
G136245 NA other downstream 446810 16811706 ~ 16863593 (+)

Expression


Co-expression Network