AMCG00012350


Basic Information

Item Value
gene id AMCG00012350
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16713346 ~ 16715975 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012350
TCGCTTTCTTCCAGGTCGGTggggttgtgttgttgttgttttggatattattattttaaagtttcttATGCAGGTCATgcttgtttaataataataataataaaattgcgTGCGATAAAAAACGATTAAGCGAACTGTAGCGCTACTAAGGCAGCGGTGTTATTGGTTCGGTGCCAGTCCAGGGGTCTCTGGATGTTGGGGCTGCGGACTCTGCTGGGAATCGGGGTCCTGGTGACATCACACTGCGCGAGGAGGGGTCGGGCTCTGGCGCACAGAGGCTCGTGTCCGGTGACCAGTGGCAGCGGGGCGTCCGGCAGGTTCAGCTCTTCCTCCATGGAGGCGGCCAAGCCGATCAGATACCTCGGCCAGGAGGAGGCCCAGAAGATCGACGAGGAGCTCTTCACAGAGTACCGCTTCAGTGTGGACCAGCTGATGGAGCTGGCAGGGCTGAGCTGTGCCACCGCCGGGTACGAGCCCACCATTGTGTACCCCAAGCGGCCCAGCAAGCCCCTGTTTGAGAACCTCACGGTGCAGTGCGAGAAGATGGACATCCTCTTCCTCCCGGAAATGCCGGCAGAGGCCGACCTGATCGACGAAGCTTACAACCTGGTGATCGACGCCATCTTTGGGTTTAGCTTCAAGGGCGCCCCCGACCTACTCATCTCCCTCACGGCGCCCAAGAAGGCGGCCCTGCATTTCCGCGGGCGCTACCACTACCTGGGGGGCCGCTTCGTGCCCCCGGCCCTGGAGCAGAAGTACCAGCTCAACCTGCCCCCGTACCGCGGCACCGACTGTGTCCACCGGCTGCCCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012350 True 813 mRNA 0.59 6 16713346 16715975

Neighbor

gene id symbol gene type direction distance location
AMCG00012347 NA coding upstream 42647 16650333 ~ 16670699 (+)
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding upstream 176101 16530753 ~ 16537245 (+)
AMCG00012342 NA coding upstream 195725 16513859 ~ 16517621 (+)
AMCG00012336 NA coding upstream 311149 16400490 ~ 16402197 (+)
AMCG00012337 NA coding upstream 334359 16367429 ~ 16378987 (+)
AMCG00012354 mex3a,mex3b,LOC107756899,LOC107671389,LOC107671388 coding downstream 96810 16812785 ~ 16818439 (+)
AMCG00012360 NA coding downstream 161402 16877377 ~ 16900435 (+)
AMCG00012366 NA coding downstream 261597 16977572 ~ 16984994 (+)
AMCG00012369 NA coding downstream 277504 16993479 ~ 16997064 (+)
AMCG00012367 NA coding downstream 306684 17022659 ~ 17029088 (+)
G136195 NA non-coding upstream 81082 16620255 ~ 16632264 (+)
G136191 NA non-coding upstream 147115 16565899 ~ 16566231 (+)
G136177 NA non-coding upstream 174197 16538062 ~ 16539149 (+)
G136051 NA non-coding upstream 517232 16193975 ~ 16196114 (+)
G136040 NA non-coding upstream 541251 16171739 ~ 16172095 (+)
G136236 NA non-coding downstream 113075 16829050 ~ 16831802 (+)
G136237 NA non-coding downstream 126592 16842567 ~ 16907105 (+)
G136286 NA non-coding downstream 196260 16912235 ~ 16914695 (+)
G136297 NA non-coding downstream 240714 16956689 ~ 16957295 (+)
G136295 LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599 non-coding downstream 241483 16957458 ~ 16978213 (+)
AMCG00012349 LOC106588560,LOC106570198 other upstream 7153 16674279 ~ 16706193 (+)
AMCG00012348 NA other upstream 64784 16560649 ~ 16648562 (+)
AMCG00012338 ppp4cb,ppp4c,LOC107571759,LOC107590569,LOC107755586,LOC107729194,LOC107567834,LOC107690278 other upstream 280533 16393699 ~ 16432813 (+)
G136076 NA other upstream 454014 16250248 ~ 16259332 (+)
AMCG00012318 ypela,ypel3,LOC103040367,LOC108411043,LOC103393221,LOC106600728,LOC105012807,LOC104942727 other upstream 530256 16176396 ~ 16183090 (+)
AMCG00012351 NA other downstream 17451 16733426 ~ 16765108 (+)
G136245 NA other downstream 95731 16811706 ~ 16863593 (+)
G136255 NA other downstream 150562 16866537 ~ 16867448 (+)
G136258 NA other downstream 155863 16871838 ~ 16875600 (+)
G136296 NA other downstream 247355 16963330 ~ 17000089 (+)

Expression


Co-expression Network