AMCG00012361


Basic Information

Item Value
gene id AMCG00012361
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16945305 ~ 16951831 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012361
ATGTTTGAATCATGGGTTAATCTGCTTAAAGAAGTCACTGCCGCCTTGACACCTGCCGAGCTGGAGGTGCCCCGTAATGCGACGCCCTGCTCCGGAGAGATCCCGATTAGTCTCACAGCAGATGCGCCACATCTGCAGCCGGGTTGCTGCCAGTCCTTGGGGAAACCAGCATCACTCACTGCAAGAGTCAAACTTGCACCAGCTGGAGACCCAAGCGTGAAGGACAAGATACGCCTTTGTTTGCAGCCTCAGATCACCAGGATGCCCAGCCCTCTAGAGAAACTGGTGGCGCAGAAGAAGGAGTCCATCGAGGCGTTGATGGAGGTGTTCGAGAGGGGGGCCGAGGTCCTGGCCAGTGCCGTGGGGGAGCTGTTCCCGCTGTGCGAGGCAGCCGCTCCGGTCCTCAGGCTGGCCCTGGACAACGTGCAGAGCAGGGAGGTCTTCTACGTGAAGGAGCAGTTCCAGGTCGTCCGCAACAAGCTGGACGTTATCTCTGAGGAGTTGGAGGACATCGACCAGGAGATAAAGAGGAGCCTAGTGGACAGCCATTACTTCACGGTGGAGGAGAACCTGCGCAACCAGTTTCGCAAGTACATGGACATCCTGAACGCCAAGGAGCAGTTCAGAGAGGTCAAGGTCCGGCTCTTCCTGGAGCATTATGGGAAGACCAGCGGGGACAAGAACCTTCACGTTCTCTACGATGCCGTCATGGGGTTCAACACCTTTGGGGAGTCGGTTCTGGAAGTGGTCCTGAGGTACGAGGCGAGGAACAGGAGGGTGCTGGAAGACTTCTGCGTCCGCTTGAAAGAGCTCTTCTGTGTGGGGCTGATCGCTCTGCTGGGCCGCGCCGCCCTCTCGgtaggggaggaggaggaacaggagctGGTGAGGCAGTGGGGCGAGAAGATGCGGGAGGTGGAAGGCAAGATGAAGGCGGCCATTGATGAGTGTGTGGCCGCCTTCCCCGAGCAGGCCCAGGAGGACGTGGAGCGGATGATCaaggagaaagaggagaagaGCAACGAGGAGTTGGCCAAAGCCCTGCAGGAGTTCCTGGCCCGAAAGTACGACTGGGTGAAGTGGTCCGTGCGAGTGATCAACCACTCCGGCAGCGGCTTCAAAAACTGGCGGGCAGGGGACAACTTTCACTGTGTGACGGGCAAGAACTGGTTTGAGTTGCTGCAGGTGAACGACACCAACGTGGTGGTGTCTTACAGCCGCTGCCCTCACCCCATCGCCAAGGAGAGCATCCAGCAGCTGATGGACAGGCCCAATCGGAAGGGCGGCGCCCAGGCTGTGGCAGAAGCAGTAGCTCAGGAGATACCAGGGTGTGTGGCAAACGCCATCAGTCGCCACAAAGAGGTCTGGACCGCCTGGAGCTTCCCGGACGAATGCCATTATTgggagaaacacaaaaatgtatatctgtgtgtgcatTCTGAATAAGCTTGGATAAGAATAGGTTTACAAGTCATTCGTAATTCTCCAAAACAGAAATCCTAACAGCTGGTaccgtgtttttttttacgtTGTTGTGTGCTCTCCACAGGATAGCAGAAGCTCATCAAGTGACCTTAGACACAGTCAGTGGACAGCCACGACTAACCAGGTTTCATAGCTCAACCTAGAACACTCAGCTCTCAACAGCGCTAGTGTGATCAGATACGAAGGTTGTTCATTCAATTAAGCGATTTAGAGATCGCTGGGGATGAAAACTCCAACACCTTGCAGCTCTCAAGCACCATAGTTGGCCACTCCTCATCTAATTGAATGAAATTAGTTGCTTAGAATGTATATTTGCCATTTACATTATCATCACAAGTCATCACAAATGGAGGATCATGGGTAATCTATAAAACCTGGTTAATCATGGCTCTCTCAGGCCAGGGACAATCACCCCTGTTTCACTCATCGTTTCATCTGCATTTTGACATAACATGAGAGAGATAAAAAGCCAGAGAGAGACACTCGGCCCGTTTGTCTGTCAGGTTCCTGGCTGTTTATTGATCTACGAATCCTATTACACAGTTTCATTGTGGATCCGAGAAAAGCTACATGAAAGTCTATATTTCAGGCTTTGAGCGGTTCAGTTCTATGGCTGTTATTATGTAATTTACACACAAATTCATTCCCGCATGCATGTCCACTGCATGTGTTAATCCTGGTTCAGCCATGTGCCTGATCTCTGCCTGGACTGATTGAGAGACACAAGCCCAGAGCAGCATGTGCCTGAAAGTGGTTCAGGGAGAAAGCCACAGTGTCTGCGTTCATTATTGTAAATGAGATATTGATTGCCTTTGCTATTGTCTACACAATTCACTTAGAGATCAACAGCTAAAGGAACGCCCATTCACTTCCTAGAAATATCTCCTCATTATGTTCAATGTTCTTCATCTGCGGAGTGGGTTGGGCGGGTTGGGTTAGGGCCACCCAAGGGTGAGGGAGAGGTAtgcctttttgtatctttctGTGAGCTTGTGGACCCCGTTGCATCACTTACACTGCAGTATATTGTAGAAAACAGGCCTGTGCTGGAcgacatttacaaatataaaattatataatttattggggggtggggcaactgaaatgtaatgtaaatgtaaattgccTTGTGGGCATATCTAaatgtatctgtaattgaccgcAGCCACAAGGCAGAGTTAGCTGAAGCAGCTCAAGTGAGGTAAATACATAATGCAAATATAGAggaataattatgaaaataaagttGCAGAACTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012361 True 2745 mRNA 0.50 3 16945305 16951831

Neighbor

gene id symbol gene type direction distance location
AMCG00012362 NA coding downstream 21321 16922806 ~ 16923984 (-)
AMCG00012363 NA coding downstream 28609 16915521 ~ 16916696 (-)
AMCG00012356 ubqln4,LOC105012604 coding downstream 69690 16863346 ~ 16875615 (-)
AMCG00012355 NA coding downstream 86899 16854236 ~ 16858406 (-)
AMCG00012358 NA coding downstream 92732 16842567 ~ 16852573 (-)
AMCG00012364 LOC108433880,LOC103372036,LOC108256189,LOC108256188,LOC103039167,LOC104942599 coding upstream 8552 16960383 ~ 16965871 (-)
AMCG00012371 NA coding upstream 34031 16985862 ~ 16990109 (-)
AMCG00012373 NA coding upstream 129076 17080907 ~ 17082207 (-)
AMCG00012384 NA coding upstream 294259 17246090 ~ 17254514 (-)
AMCG00012383 NA coding upstream 312932 17264763 ~ 17267311 (-)
G136226 NA non-coding downstream 233672 16709574 ~ 16711633 (-)
G136225 NA non-coding downstream 240492 16704588 ~ 16704813 (-)
G136224 NA non-coding downstream 245101 16699989 ~ 16700204 (-)
G136203 NA non-coding downstream 302692 16642363 ~ 16642613 (-)
G136186 NA non-coding downstream 393024 16552030 ~ 16552281 (-)
G136307 NA non-coding upstream 4311 16956142 ~ 16956359 (-)
G136372 NA non-coding upstream 87506 17039337 ~ 17039966 (-)
G136376 NA non-coding upstream 104781 17056612 ~ 17057001 (-)
G136382 NA non-coding upstream 140712 17092543 ~ 17093357 (-)
G136383 NA non-coding upstream 150572 17102403 ~ 17104457 (-)
AMCG00012365 NA other downstream 30620 16911492 ~ 16914685 (-)
G136223 LOC105892008 other downstream 245514 16699475 ~ 16699791 (-)
G136222 NA other downstream 246195 16698642 ~ 16699110 (-)
AMCG00012340 NA other downstream 512492 16415107 ~ 16432813 (-)
G136125 NA other downstream 630912 16312721 ~ 16314393 (-)
AMCG00012372 tpm3,LOC106570192 other upstream 112725 17064556 ~ 17098725 (-)
G136378 NA other upstream 141668 17093499 ~ 17133907 (-)
G136412 NA other upstream 249943 17201774 ~ 17203233 (-)
AMCG00012385 NA other upstream 256947 17208778 ~ 17217639 (-)
G136408 NA other upstream 282097 17233928 ~ 17242827 (-)

Expression


Co-expression Network