AMCG00012362


Basic Information

Item Value
gene id AMCG00012362
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16922806 ~ 16923984 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012362
ATGGAGCGCGTTGAAGAATGGGTGTTGGAAAACAAGGACAAGATCGAACTGGGAGTCGAGATGATAGGGAAGGGCTGTGAAGTCCTGGCGGCCACTGTAGGTCAACTACACCCCCTGCTAGAGGCAATCTTTGTAGCTTCTAAAGAAATACTGAGCAACCCAGACAGCAATGAGGCCAAGTACCTGACCGAGCAGATCGAGAAAGTCAGCCAGAGACTGGAGGGCATTCAAGATGAGCTGGACACCATCCAGAGAGAGCAAAAGAAGACCTCCATGAACAAGATGAACTTCGACTACGAGGTGCAGATGATTAGCCAGTATGAGAAGTACCTGGAGTTTGTCAACGCCAAGCCTAAGTTTAAGGAAACTAGGAAGGACAAATTCATGAAGCACTTCCAGGCAACGGACGGGGACATGAACCTGGACGCTCTGTACAACTCGGTGACCGGGGAGAGCCTGAGCGGGGAGTCAGTGCTGGAGACCATCTTGGTCACGGAGGAGAAGAGCCGGAGGGCCGTGGAGGAGTTCTGCGCCGTGCTGAAGAAGCTGTTCATCGTGGGGCTGGTGGCCGTCATGGGCCACGCTGCCCTGAAGGAGGGGGCGGTGGGGGAGTCGCTGATGAAGAAGTGGTGCCTGCGCATGGAGGACGTGGAGAGGCGCATGAAGGCGGCTGTGGACGACTGCACGGAGAACTTTGCCACACAGGCCAAGCTGGACGTGGAGAACCAGATGCGGGAGACGCCGGCAAAAATCGCCCCGGAGTTCGTGCAGCCGGTCCTGGAGTTCTTGCAGAAGAAGTACGATTGGGTTTGCTGGTCGGTGCGGGTTTACAATAACACTGGAAAATGGTTCTGGAACTGGCTAGCTGGAAAGAAATTCCAGGGCAGCGGCGGGGGCAACTTCTTTGACATCTTGaccaaaaacaacatcaatgtGGTGGTGTCCTACAGCATCGGCCCCCAGCCCATCAACAAGAGCCAGATTCAGGAACTTGTTGAGAGCCAGAAGATCACCAACAACATGCAGGACTTGGCCCAGTCCATCTACAACAACTTTCCGAACTGCGTCGTGCACGCCATCAGCCGCTACAAGGACGTTGAGGAGTACAACAACTTTCAGCCTGAGTGTTACTACTATGTGAAGCATAAAAAGTGCTATCTGTGTGTTCATCCCGAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012362 True 1179 mRNA 0.54 1 16922806 16923984

Neighbor

gene id symbol gene type direction distance location
AMCG00012363 NA coding downstream 6110 16915521 ~ 16916696 (-)
AMCG00012356 ubqln4,LOC105012604 coding downstream 47191 16863346 ~ 16875615 (-)
AMCG00012355 NA coding downstream 64400 16854236 ~ 16858406 (-)
AMCG00012358 NA coding downstream 70233 16842567 ~ 16852573 (-)
AMCG00012357 LOC107726679,LOC107671462,LOC107592127 coding downstream 81620 16829034 ~ 16841186 (-)
AMCG00012361 NA coding upstream 21321 16945305 ~ 16951831 (-)
AMCG00012364 LOC108433880,LOC103372036,LOC108256189,LOC108256188,LOC103039167,LOC104942599 coding upstream 36399 16960383 ~ 16965871 (-)
AMCG00012371 NA coding upstream 61878 16985862 ~ 16990109 (-)
AMCG00012373 NA coding upstream 156923 17080907 ~ 17082207 (-)
AMCG00012384 NA coding upstream 322106 17246090 ~ 17254514 (-)
G136226 NA non-coding downstream 211173 16709574 ~ 16711633 (-)
G136225 NA non-coding downstream 217993 16704588 ~ 16704813 (-)
G136224 NA non-coding downstream 222602 16699989 ~ 16700204 (-)
G136203 NA non-coding downstream 280193 16642363 ~ 16642613 (-)
G136186 NA non-coding downstream 370525 16552030 ~ 16552281 (-)
G136307 NA non-coding upstream 32158 16956142 ~ 16956359 (-)
G136372 NA non-coding upstream 115353 17039337 ~ 17039966 (-)
G136376 NA non-coding upstream 132628 17056612 ~ 17057001 (-)
G136382 NA non-coding upstream 168559 17092543 ~ 17093357 (-)
G136383 NA non-coding upstream 178419 17102403 ~ 17104457 (-)
AMCG00012365 NA other downstream 8121 16911492 ~ 16914685 (-)
G136223 LOC105892008 other downstream 223015 16699475 ~ 16699791 (-)
G136222 NA other downstream 223696 16698642 ~ 16699110 (-)
AMCG00012340 NA other downstream 489993 16415107 ~ 16432813 (-)
G136125 NA other downstream 608413 16312721 ~ 16314393 (-)
AMCG00012372 tpm3,LOC106570192 other upstream 140572 17064556 ~ 17098725 (-)
G136378 NA other upstream 169515 17093499 ~ 17133907 (-)
G136412 NA other upstream 277790 17201774 ~ 17203233 (-)
AMCG00012385 NA other upstream 284794 17208778 ~ 17217639 (-)
G136408 NA other upstream 309944 17233928 ~ 17242827 (-)

Expression


Co-expression Network