AMCG00012364 (LOC108433880,LOC103372036,LOC108256189,LOC108256188,LOC103039167,LOC104942599)


Basic Information

Item Value
gene id AMCG00012364
gene name LOC108433880,LOC103372036,LOC108256189,LOC108256188,LOC103039167,LOC104942599
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16960383 ~ 16965871 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012364
ATGCGACCTCACACCAGGGCTGTGCTGTGGCCAGGAAATGTGACATTCATCCCCCAGTTACCTGCAGAATCAAGCCAGCTAACGCGTCCGACTGCAGGGAAGAGACTCCGCTCCCCGTCTGGCCTGGCCATGGGCGACACCGAGAACATCAGGAAGACGGCCGCCAAGGTGCTGTCTTGCGTGGAGAAAGTCTCCTCCTTCGCCACCTCCATCGACCCCCTCTTTGGCATCGTCACCTCCCTGGTGGCCGTCGTGCGGAAGGGCGTCTACGACGAGGAGGCCAACGCCCTGGAGGAGGAGTTCCAGACGGTCCACACCAAGCTGGAGAGCATCTCGCAGCAGAACAGGCAGACCCTGAAGCAGATACGCATCGACGAGATCCACGAGACCTTCTCCAAGTACGAGGAGTACCTCAAACACCAGTACCAGGCCTTCAGCAGCATGGTAGAAATGGTGAAGACCGACCCGGAACACAAGGAGAGCCACTTGCAGGACTTCCAGGACACGTACGAGAGAGACAAGGGCGAGCTGAGCCTGGACGTGTTCTACTACGGGGTGATGGGGACGCGCCGGGCCTTCGGGAGGCCTCTGCTGAAGGTCTACATGGAGCACTGCGACGGCAACATCAAGGTCATGGAGCAGAGGTGCTCCCACCTGACCAACCTGTTCCACATCGGGCTCATCTCGCTCATGGCCTACACCGCCGTCATCGAGGACGACGAGGACGACGTGAAGTGCAAGTGGACCCAGAGGGTGGTGGACATCCAAGCCAAGATGCAGGAGGAAGCCATGTCCGACGACATCCAGGAAGACCGTGACAAGCTGAAGAGGGGCATTGTGAAGGTGCTGGAGTGTGTGGCCACCATCTCGTCGGCGGCCGCCGTGGTCAATCCCATCTTCGGCATCGCGGGCTCGCTCATCCGCGTAGTGCTGCACCAGATCGACGATGAGGAGATCCAGACCCTCAAGAGGGAGTTCAACAGTGTCAACCGAGCCCTGGAAGACCTGTCGCAGCAGAACCGCAATGCCCTGCTGCAGATCAAGAAGGAGACCGTGGACGGCCAGTACTCCAAGGTGGAGGAGAACCTCAAGAACCAGTTCCGCAAGTTCATGGAGCTGGTGGAGGCCCGGCCCGACCTGCAGGGCCGCAAGAGGGAGGATTTCGAGGAGAGCTACAGCAACGACCTGGGCGACCAGAACCTGCACTCGCTGTACGACGGCGTCATGGGCAAACCCAAGCTCTTCAGCAAGCCCATCCTGGAGGTGTACATGAAGCACTCGGGGGGGGACCGCAGGGCCATGGAGCGCCTCTGCACCCGGCTCACCTACCTGTTCTGCATCGGGCTGATCGCACTCATGGGCTACGCGGCCGTGGTGGGCGACGACGAGGAGGGGCTGAGCGAAGAGTGGACCGAGAAGATGGAGGACGTGCAGAGGCGCATGCAGGAGGTGCTGAGGATGTGCAAGTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC108433880 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012364 True 1470 mRNA 0.61 3 16960383 16965871

Neighbor

gene id symbol gene type direction distance location
AMCG00012361 NA coding downstream 8552 16945305 ~ 16951831 (-)
AMCG00012362 NA coding downstream 36399 16922806 ~ 16923984 (-)
AMCG00012363 NA coding downstream 43687 16915521 ~ 16916696 (-)
AMCG00012356 ubqln4,LOC105012604 coding downstream 84768 16863346 ~ 16875615 (-)
AMCG00012355 NA coding downstream 101977 16854236 ~ 16858406 (-)
AMCG00012371 NA coding upstream 19991 16985862 ~ 16990109 (-)
AMCG00012373 NA coding upstream 115036 17080907 ~ 17082207 (-)
AMCG00012384 NA coding upstream 280219 17246090 ~ 17254514 (-)
AMCG00012383 NA coding upstream 298892 17264763 ~ 17267311 (-)
AMCG00012390 NA coding upstream 378483 17344354 ~ 17364449 (-)
G136307 NA non-coding downstream 4024 16956142 ~ 16956359 (-)
G136226 NA non-coding downstream 248750 16709574 ~ 16711633 (-)
G136225 NA non-coding downstream 255570 16704588 ~ 16704813 (-)
G136224 NA non-coding downstream 260179 16699989 ~ 16700204 (-)
G136203 NA non-coding downstream 317770 16642363 ~ 16642613 (-)
G136372 NA non-coding upstream 73466 17039337 ~ 17039966 (-)
G136376 NA non-coding upstream 90741 17056612 ~ 17057001 (-)
G136382 NA non-coding upstream 126672 17092543 ~ 17093357 (-)
G136383 NA non-coding upstream 136532 17102403 ~ 17104457 (-)
G136392 NA non-coding upstream 160335 17126206 ~ 17129299 (-)
AMCG00012365 NA other downstream 45698 16911492 ~ 16914685 (-)
G136223 LOC105892008 other downstream 260592 16699475 ~ 16699791 (-)
G136222 NA other downstream 261273 16698642 ~ 16699110 (-)
AMCG00012340 NA other downstream 527570 16415107 ~ 16432813 (-)
G136125 NA other downstream 645990 16312721 ~ 16314393 (-)
AMCG00012372 tpm3,LOC106570192 other upstream 98685 17064556 ~ 17098725 (-)
G136378 NA other upstream 127628 17093499 ~ 17133907 (-)
G136412 NA other upstream 235903 17201774 ~ 17203233 (-)
AMCG00012385 NA other upstream 242907 17208778 ~ 17217639 (-)
G136408 NA other upstream 268057 17233928 ~ 17242827 (-)

Expression


Co-expression Network