AMCG00012368


Basic Information

Item Value
gene id AMCG00012368
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17056530 ~ 17063053 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012368
GAATCGTGACTTTCGCAAATACAAATGTGGTGCGCTCATATTGGGCTTTATACGGTATGGCGCTGGCTGTGCAGGGAAGTGGCGCGGCGTAGCGTGTTGTGAGGATGGGGCCGGATGGGGCCTCTCTGTCCGCCTGTGAGTCGAGTCCGTGTCCCGGCCGGTGACAGCGCGTCAGTCCCCTCGGTCCGGACGAGGCAGGCAGACGGGCTCTACCATGACGGAGCCCCGGCTGGTGCTGCTGTTCAGCGGGAAGAGGAAGTCGGGGAAGGACCACATCGCCGAGCTGCTGCGGGAGAGgagAGGAGGCTGGACTTCCACAAGCTGCTGGACTCCAGTGGCTACAAGGAGCAGTACAGGGCTGACATGATCCAGTGGGGGGAGCGGCGCAGGCAGGCGGACCCCGGGCTTGACGCTCGGCGCCGGTCGGACCTGGAGTGGTTCTGGAACCGGTTTGGGGAGCGCAGCCGGACTGTGCGGGTCGAGGCTTCAGAGGACAAACGCAGAGAGAGGGGCTGGGAGTTCACtgcaggtgtggACGACGCCGAGTCAGAATGCGGGCTGGACGAAGGCGTGGCCTTCGATTGGACGATCCACAACGATGGGGACCAGCAGCGATTAGAGGAGCAGCTGAAGGGGCTCCTCTCATTGGCCAGGGAGAGAGCGCAGGCAtaggagaggagggggtgggaATGAAGCAGTGGGGGGACAGGCAACACAGCCTGGGAGAAACTGGGAACTTTATTCCCCTCACTAGACTGCTGGGCCTTTCTCTCTGGTTCGATCCCCCCCCCTCAACTTCTGAAAATGTGGCATACCTGTCCCCCCAGGTCCGGGAGGGATGGGTCTAATTGGCTACCATCCCTTGGCTACCAACTACCTTGAGTTCTCGCCTCCACCCTGGTTTATACAGTGTGTGAATAAAGACATTTGAATATCAGTTCCTGTGTGGGTGGGTGATCGTTTGTCATCTCTGAGGTCTGTATCGGTCACGCACTGGCcgagttcaattaaataaacaacatcaatcaatccattttatttgtatagcgccatTCCCAGGGTAGCCACAGCGCTTTAGAGAGTGGTAAACGTACAACGtaaaattacatacatttcttagcagacgccctgaATTCCAATCATTGCAACATATCCCATGATTTTTACATACCatgacccatttatacaggCTGGGTTTGTACAGTACTGCATTCTGGGTACACTACCTTGCACAGTGTCCCCCActtgggattgaacccacaaccctccactcagcc

Function

GO: NA

KEGG:

id description
K13273 PMVK; phosphomevalonate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012368 True 1277 mRNA 0.57 4 17056530 17063053

Neighbor

gene id symbol gene type direction distance location
AMCG00012370 NA coding upstream 5484 17042195 ~ 17051046 (+)
AMCG00012367 NA coding upstream 27442 17022659 ~ 17029088 (+)
AMCG00012369 NA coding upstream 59466 16993479 ~ 16997064 (+)
AMCG00012366 NA coding upstream 71536 16977572 ~ 16984994 (+)
AMCG00012360 NA coding upstream 156095 16877377 ~ 16900435 (+)
AMCG00012375 NA coding downstream 69509 17132562 ~ 17133006 (+)
AMCG00012376 NA coding downstream 96392 17159445 ~ 17168083 (+)
AMCG00012380 NA coding downstream 122177 17185230 ~ 17193976 (+)
AMCG00012381 NA coding downstream 133386 17196439 ~ 17198701 (+)
AMCG00012378 NA coding downstream 158330 17221383 ~ 17222414 (+)
G136295 LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599 non-coding upstream 78317 16957458 ~ 16978213 (+)
G136297 NA non-coding upstream 99235 16956689 ~ 16957295 (+)
G136286 NA non-coding upstream 141835 16912235 ~ 16914695 (+)
G136237 NA non-coding upstream 149425 16842567 ~ 16907105 (+)
G136236 NA non-coding upstream 224728 16829050 ~ 16831802 (+)
G136351 NA non-coding downstream 101923 17164976 ~ 17172106 (+)
G136436 NA non-coding downstream 227092 17290145 ~ 17290529 (+)
G136444 NA non-coding downstream 237474 17300527 ~ 17304999 (+)
G136457 NA non-coding downstream 267741 17330794 ~ 17332570 (+)
G136458 NA non-coding downstream 276525 17339578 ~ 17340736 (+)
G136296 NA other upstream 56441 16963330 ~ 17000089 (+)
G136258 NA other upstream 180930 16871838 ~ 16875600 (+)
G136255 NA other upstream 189082 16866537 ~ 16867448 (+)
G136245 NA other upstream 192937 16811706 ~ 16863593 (+)
AMCG00012351 NA other upstream 291422 16733426 ~ 16765108 (+)
AMCG00012374 NA other downstream 62960 17126013 ~ 17129339 (+)
G136341 NA other downstream 64102 17127155 ~ 17264404 (+)
AMCG00012387 NA other downstream 321883 17384936 ~ 17388799 (+)
G136489 NA other downstream 348708 17411761 ~ 17476097 (+)
G136499 NA other downstream 396431 17459484 ~ 17466059 (+)

Expression


Co-expression Network