AMCG00012370


Basic Information

Item Value
gene id AMCG00012370
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17042195 ~ 17051046 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012370
gtcagtGCTGCAGAATGACTCCAGTCTGATGGGCTTGTTCTACAGCGTGTTGTCCTCTCTGCCCCCCACCAAGACACAGGGACTCCCCTCCCCATACCAAAGCCACAACTATAACACCCCAACCCCCACCATGCAGGACCAGGCCTGGGCCTTCCTTTCTCCGTTGTGCTGGGACGCCCTGTTCCAGGGGGGGCCCTCTCTCCCCCGGCCACACTTCAATCTGCTGGCCTGGGGGTCACAGCCCCTGCTGCAGGACAGTCAGGGCCCCCTAACTCCCCTTCCCTCACAGCTGGCCCAAGAACATGTGGGACACAAGATGCAGGTGTTCACGGCTGTGTTCGGGTCTCTCTCTCCGGCGTGGCGTTCCCAGGTCCTGCAGTGGGTCAAACCGCTCATCGTCCAGAACCTCTTCAACTGCAGCCTGGCCCCCCTGAACGCCACCATCCCGGGAAcacgCTGCTTTTCTGGGCTGCAGTGGCTGAGTCCTGCAatgTGTGAGTTCGCCAAGAAGCCGCAGTTCCAGATGACGTTCTCGGGGGCAGGGGAGGCCCTGGAGCACACCGTGGCACGCCGGCTCCTGGGGCAACTCCAACAGAACTGCCCCAACAGCACTCAGAGCCCAGAGCGgctGGGCAGTCTAGTGTGTTTCATGGATGATCTGCAGTCAGTCAATGCATCAGTCTATCAGCAAGTTTTACTGGAGCTCAATGGCTGCAAGAACTCAGGTGTGGAAAAgttgaAGAGGCAGCTGGTGGAGAAGATGATGTCTTCAGGGTCGGTAATGTCTGCCGGGACCCTGCATTCCCTGGGGACCGCGGCGTCCTCCCTGTCCATCTCCCAGCTGGCCTCTCTATCCCTCGATGAGCTGCAGGACGCCCTGTCAACCCTGGCGGGGGCACACTGGACCCCCGCGCAGGCTCGCACCCTCGCCAAGAAACTCACCGCGAACGGGGGACAGGTGAATGTGACAATGTTGAGGGCTATGGGCTCGGTGATCCGGGGGATGAACAGAGAGGTCCTCCAGGCACTAGGGGGCGCCCTGCTGAGGAGCGGAGACCTGGACATCCTGGCCAAAGACATGTCCACCCTGCAGAGGGCTGCGGTGCTGGAAGGACTGCTCAGTAATGCCAGTGCCGCGCTGTTGCTGCAAAGTGTGTCCGGCCCCCTGCTGGCCAGCGTGTCACTGCACTGCCTGCAGTCGGCCAACCTCAGCTCAGCCCAGGACCTGCAGGGCAAGAACTGGACCATAGCacagGCTGCCTACCTGGTGAAGAGCATCTTCAAAGGGAAGATAGGTCCTCAGGAGATCAGGCAGGACCCCCTAATCCTAACTCTCCTGTTCAATCTGGACACAGCCCTGTCCCTATCCCTAAGCCTGTCCCTGACCCAGCCCTGGCCCAGCCGTGACCCTGTCCCTGACCCTGTCCCTGACCCTGTCCTTGACCCAGCCCTGTCCCTgaccctgtccctgtccctgtccctgaccctgtccctgtcccagccctctccctACTCAGCCttgtccctctccctgtccctgtgCCTGTCCCTGACCCTGTCCCCGACCCTGACCCTGtgcctccttctctctctgtactcCAGTGCCCTGGGCTCAGCGggtaaAAACGCGTCAACTCTGACTGCGGATGATGTTTCTGTTCTGGGGCCCCTGCTGTGTGAGCTGGGGCCCCAAGATATGTCCGCCCTGCCCGCCACCATCCTGAACACCAGCCTGCCCAGCCTGGCCCAGTGCCGGCCGTTCCTGTTGCTGAATGACACCGCCCTCCGCTCACTGCCCAGCCAgCCCTGGTTGAAGACAGCATTGACAGACCTCCTGGACGCTCAGCCGGCCCCCTCAGCCGTGCCCCACCCCCCAGAGTTCCAGCAGGGCCCAGACCTCACCGCCCTGCGCTGGAAACTGTACTCCCTCACCACAGCGTCCGCCACGGGCAACCGCCGGAAGCGCGAGGTGGCCACCTCCCCCACCGTACAGCAGATTCTGGATCTGGGAGTGAGTAACGCGTTGTGGTCCCCCGCCCAGCTGAGCGCCCTGACGCCCCAGGTCTTCAACGCCACTCTGGGCTGTGTGACCCCGGCCTTCACCGCCCCCGAGCTGCGCCTACTCAGCCTCTCGCTGGACACACTGGAGCCCCTGGCCGCCTGCAACTGGACACAGGCCCAGAGAGAGGCGATGATGCAGGGCTTTCTGGAGCACAGTGGAACACAGGCGGGGAAGCTGGGAGCTGTGGAGCTGGTGGGACTGGGCCAGTTCGTGTGTGGGATGAGTCCCGAGCAGGTCTCTCTGATCAGCAGCACCTCCTACAGGACGGCTGTGCCACTCATCCCCCCCGCCAGGCTGGCAGCACTCTCGGCCAACCAGCTGCGTGCCCTGGGGCCTACCAATGCTGGCATGGTGACAGAGGCTCAGATGCTAGCCCTGGGGGAGGAGCAGCAGAGGGCGCTGGCGGAGGCGGTGGGGGTGCAGTTCACCCGGGCCGCGACTCTCCccaccaccactaccaccacccGCCCTGTCACTACCGCTACCCCCCTGGCACTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012370 True 2563 mRNA 0.63 19 17042195 17051046

Neighbor

gene id symbol gene type direction distance location
AMCG00012367 NA coding upstream 13107 17022659 ~ 17029088 (+)
AMCG00012369 NA coding upstream 45131 16993479 ~ 16997064 (+)
AMCG00012366 NA coding upstream 57201 16977572 ~ 16984994 (+)
AMCG00012360 NA coding upstream 141760 16877377 ~ 16900435 (+)
AMCG00012354 mex3a,mex3b,LOC107756899,LOC107671389,LOC107671388 coding upstream 223756 16812785 ~ 16818439 (+)
AMCG00012368 NA coding downstream 5484 17056530 ~ 17063053 (+)
AMCG00012375 NA coding downstream 81516 17132562 ~ 17133006 (+)
AMCG00012376 NA coding downstream 108399 17159445 ~ 17168083 (+)
AMCG00012380 NA coding downstream 134184 17185230 ~ 17193976 (+)
AMCG00012381 NA coding downstream 145393 17196439 ~ 17198701 (+)
G136295 LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599 non-coding upstream 63982 16957458 ~ 16978213 (+)
G136297 NA non-coding upstream 84900 16956689 ~ 16957295 (+)
G136286 NA non-coding upstream 127500 16912235 ~ 16914695 (+)
G136237 NA non-coding upstream 135090 16842567 ~ 16907105 (+)
G136236 NA non-coding upstream 210393 16829050 ~ 16831802 (+)
G136351 NA non-coding downstream 113930 17164976 ~ 17172106 (+)
G136436 NA non-coding downstream 239099 17290145 ~ 17290529 (+)
G136444 NA non-coding downstream 249481 17300527 ~ 17304999 (+)
G136457 NA non-coding downstream 279748 17330794 ~ 17332570 (+)
G136458 NA non-coding downstream 288532 17339578 ~ 17340736 (+)
G136296 NA other upstream 42106 16963330 ~ 17000089 (+)
G136258 NA other upstream 166595 16871838 ~ 16875600 (+)
G136255 NA other upstream 174747 16866537 ~ 16867448 (+)
G136245 NA other upstream 178602 16811706 ~ 16863593 (+)
AMCG00012351 NA other upstream 277087 16733426 ~ 16765108 (+)
AMCG00012374 NA other downstream 74967 17126013 ~ 17129339 (+)
G136341 NA other downstream 76109 17127155 ~ 17264404 (+)
AMCG00012387 NA other downstream 333890 17384936 ~ 17388799 (+)
G136489 NA other downstream 360715 17411761 ~ 17476097 (+)
G136499 NA other downstream 408438 17459484 ~ 17466059 (+)

Expression


Co-expression Network