AMCG00012371


Basic Information

Item Value
gene id AMCG00012371
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16985862 ~ 16990109 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012371
ATGGGGAAAGGGCTGCGGTGTGTCCAGTGCGGCACCCGGCGAGAGAGTCTCCTTTTCAGCGGCCCTGACTTCCAGAAGTACGCAGACCGAGGCGCCCAGTCCGCGCCCGCCGACGAGGAGGTCATCGCAGGCGCCGTGAGGGCGGCCGTGGAGGCGGTGGTGCGGCTCGTCTGCGGCGTGAAGGACGCCAGGCTCCGGGACTGTCAGGCCAGGGCGGccgagagggacagggaggCCGAGCGGCTGCGGGTCCAGCTGGAGACGGCGGAGCGGGAGCTCGGAGACCTGCGGCAGCACGTCGGGAATGTCTCTGGCCTGTGTCTGCACGTGAAGGTGGGCCACATTGCCAGGATGTGTGTGAGTGGCACTGGAGAACTGAAGGACGCTGctactttttgtgttttagatCCTGGTGAGGGGCCAGCTGTCGGGGACATCAAGGTAGAAGCGGTTAGCGCTTCGCCGACCCCAGAGCCGACCAGCGAGGAATCCCACCATCTGCGGCCTGATGGGGATGCCGTCAGTGACCCCAGGCTGGTGCCCTGTGCCGGACATGAAGGTGGCCTGGACACATTGCCCACCCTGGAGCAGCGCTGTGAGCCGGAGGAGACCCAAGTGAAAAAGGAACCTCCTGACGAGGCTTGGGTGACGTGGGAGGCGTCTGAGAGCAACGCGTGCGCCAGCGAGCCGGAGAACAAGCCATGCGGTGGGGCAGTGGAGCCGGTCAAGGCTGGAGACCCCCAGTCTGCCCCTCCCAAGCATTCCAGAAACTCCCGCTGGAGACGTGCCTCTAAAGCGTCTCTGAAGCAAGACCCGGGCATCCAAAAAGAGTCCCAGCAAAGCAGAGAGCCGGGGCCCTCCGGGGCCCTTGAGCAAAGACTGAGGATTGTCCGGCTGGCGGCGGCCGAGAGGCAGAGACGCTACCGAGAGAAGCTCCGCGCCGACCCCGAGCGAGCCCACgccctgagagagaaagagctcCGGAGATACCATGAGAGGAAGAAGCTGATCGGAGAGCTGCCGGAGACCACACAGAGGCAACGACGGGAGGCATGGCGGGCGGCAGCCAATCGctacagacagaaaaagaagCTCCTGCCCTCTGATGCCTCAGGAACTCTCTGCCCAGGTGTTTGATGTTAGGGTCTGAGGAGAGCAGGCCTGGCGCGTGCGGAGAGGACGGCCGTATCGCCTTAAACAAACCCGCTGCACCAAATAGACAATAGTATTGGAGCTTTCTAGAGCCAAAATACAAACCAATGCATATGTTGGAACAGAAATATCATCGATTTATTGCATTACAGGAAGTTGCGAATTTGTCGTgctataattaaatacaatacacacgtttttaaacaaaacaagcttatttttgtgttctgtaCCTGCTGAGTTGCTTTTCAGGATCATAGTATTTTAATGCcgcaattaaatgtaatatgaatgCTTTACATTGCTTAAAGCAGAGTGATGTTACCAAGAAATTTCGGCACTCCCACGAAACCACCAATTTTTTTATTAGGGCATCTGTACTTCGTGTTTTAGACAAGCAGCGCTTAATTGCCAGCATGGGTTTTGAAATTGGGCCCGTCCTATTAACAGGGAATTCCCATTTTTGACTGTCGGCTTAAGAGGTTAAGTAAAATCATAAGTCTTGATTGACCAGCATACCttatgtggaaaaataattcaattcattcattcagtcacTAACATGGTGCTgctttacacaatttaaagcattcgtattacaattaattgtggcattaaaatactaTGATGCTGAAAAGCAATTCATCTgggataaaacacaaaaaataagctTATATTGTTTAACAAcatgtgttttgcatttcatgGAAGCACGACAAATTCACCACATCCTTTAAAGCATTACGCAGatcatttttctatttcaacacatgtattggtttgtattttggCCCTAGAAAGCTTCCGTACAGATCGGGCAGTTGGTTAGAGCGAGGAGTCGAAGTCGAAGAATTCTTCCCCCTGCTCGCGGCTTCCAAGAACTAGAGTGTGTTGTGCTCAAGGCAACCCGGCAGACCAAAGGGATTATAATTACGATATTGGCCTGCAGAGTCTCGGAGCAGATGACGAGAAGAGAAGCACAGACGCTCGGGACACAAACTGAACCCAGACCCCGTGCTCGGGTTGTGCAGCAGCCTGTGAGCCTCCACAGCCTCGACCGCTTGTGCTGCCCCCCCTGGTGGACAGAAACATCGTGCCAGCGGTGGGAACCCAGCGCGTGTAaagtgtgtaaataaatgtgtaaaaaccAGGACACTACTGGCTACTGTACAGTTTTcctcaaataataaaatccattAATAAGAGCTTTGAGAATCCTATATTCGTTTCAGACTTGTATGAAGCCCATGTTTCCCTGGTTTAAGATCTCGGGTTGCAGGGTGTCCTATATCAGCCCTGATCTGTTATCGATATCTTTGGCTCACTGGCTGAAAACAatccagatttgtttttcttatggaTATCCAGTTAAGGACAATAAAATGTGGTAATGGTGGTTTGTCTGATGTGAAATTTCCCCTATGCATGGGTCACTTTCTTCTGGCTACTGTCTTTAGCCATCTATGCAGTGTatagaaataatgttatttaataaatgATCAACACCTTGTTGCCatgcattcattttccctttagTAGTCATTCTAATCTGTAATTGTCTCCACTTTGGATCAAAATAATGTTGCGGTAAGAATTACTTTGATCAACTGTGCACTCTGGGCACGGGTGAATAAATGTTGAAAGTGTGCAGTCTtctgttattgtg

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012371 True 2818 mRNA 0.50 4 16985862 16990109

Neighbor

gene id symbol gene type direction distance location
AMCG00012364 LOC108433880,LOC103372036,LOC108256189,LOC108256188,LOC103039167,LOC104942599 coding downstream 19991 16960383 ~ 16965871 (-)
AMCG00012361 NA coding downstream 34031 16945305 ~ 16951831 (-)
AMCG00012362 NA coding downstream 61878 16922806 ~ 16923984 (-)
AMCG00012363 NA coding downstream 69166 16915521 ~ 16916696 (-)
AMCG00012356 ubqln4,LOC105012604 coding downstream 110247 16863346 ~ 16875615 (-)
AMCG00012373 NA coding upstream 90798 17080907 ~ 17082207 (-)
AMCG00012384 NA coding upstream 255981 17246090 ~ 17254514 (-)
AMCG00012383 NA coding upstream 274654 17264763 ~ 17267311 (-)
AMCG00012390 NA coding upstream 354245 17344354 ~ 17364449 (-)
AMCG00012394 NA coding upstream 469814 17459923 ~ 17465336 (-)
G136307 NA non-coding downstream 29503 16956142 ~ 16956359 (-)
G136226 NA non-coding downstream 274229 16709574 ~ 16711633 (-)
G136225 NA non-coding downstream 281049 16704588 ~ 16704813 (-)
G136224 NA non-coding downstream 285658 16699989 ~ 16700204 (-)
G136203 NA non-coding downstream 343249 16642363 ~ 16642613 (-)
G136372 NA non-coding upstream 49228 17039337 ~ 17039966 (-)
G136376 NA non-coding upstream 66503 17056612 ~ 17057001 (-)
G136382 NA non-coding upstream 102434 17092543 ~ 17093357 (-)
G136383 NA non-coding upstream 112294 17102403 ~ 17104457 (-)
G136392 NA non-coding upstream 136097 17126206 ~ 17129299 (-)
AMCG00012365 NA other downstream 71177 16911492 ~ 16914685 (-)
G136223 LOC105892008 other downstream 286071 16699475 ~ 16699791 (-)
G136222 NA other downstream 286752 16698642 ~ 16699110 (-)
AMCG00012340 NA other downstream 553049 16415107 ~ 16432813 (-)
G136125 NA other downstream 671469 16312721 ~ 16314393 (-)
AMCG00012372 tpm3,LOC106570192 other upstream 74447 17064556 ~ 17098725 (-)
G136378 NA other upstream 103390 17093499 ~ 17133907 (-)
G136412 NA other upstream 211665 17201774 ~ 17203233 (-)
AMCG00012385 NA other upstream 218669 17208778 ~ 17217639 (-)
G136408 NA other upstream 243819 17233928 ~ 17242827 (-)

Expression


Co-expression Network