AMCG00012374


Basic Information

Item Value
gene id AMCG00012374
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17126013 ~ 17129339 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012374
ATGGAGGCAGCTATAAACACACTGGTGGGCCAGTTCAAGACCTTCGCAGGGGGCGACGGGCGCGGCGACACGCTGAGCCGAGACGAGTTCCGCAGCCTGGTGTCCTCGCAGCTGCCCACCTTTGTCAAGAACTCCAGTGACCCGGCAGCGGTGGACCAGCTCATGAGCTCATTGGACGAGAACAATGACGGCGAGCTCACCTTCCTGGAATTCTGGCAGTTGATTGGCCGTCTGGCGAGCAAGCAGGCGGGCTTCAGCTAA
>TU171327
TTTAACCACAGAGTGTCCACTAGCTCCCACGCCTCTGCAGTGAGGCTGTTGCCGAGGCCCTATTAACCATTCACCAACAGCACAGAGCCAGAGCACAGCGTGAGAGACACGgaccgactgacacactgacggaatgaatgaatgaatgactgcaagtgtgtgtctgtgaatgagTTTATTAGTGCCTGTATaacttaaatgtgtgtgtgtggatgtggatgtctctgagtgtgagtgtgtgtacgtATGTGTATctctctgagtgtgtgtgtgtgtgtgagattgtaTCTCTcggagtgtgagtgtgtgtacgtATGTGTATctctctgagtgtgtgtgtgtgtgtgagattgtaTCTCTcggagtgtgagtgtgtgtacatgtgtgtatctctctgagtgtgagtgtgtgtgtacatgtatgtatctctgagtgtgagtgtgtgtacgtgtgtgtatctctctgagtgtgtgtgagtgtgtgtgtacatgtatgtatctCCGAgtgttagtgtgagtgtgtgtacgtATGTGTATCTctctgagtgtgagtgtgtgtctctctgagtgtgagtgtgtgtacgtgtgtgtatctcactgagtgtgagtgtgtgtgtacatgtatgtatctCTGAgtgttagtgtgagtgtgtgtacgtATGTGTATCTctctgagtgtgagtgtgtgtctctctgagtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgagattgtatctctgagtgtgagtgtgtgtgtgagttaaTATCTcttagtgtgagtgtgtatccAGGTGTACAATGTCACCTTGTCAACTACAGCTatcatggggaaaaaagaacacaaagcaGAAAAAGTAAATTATCTATTTTCCGCTGACCTCGGATATTCCAAGGGATAGGTAGAGTATAaagccagagagagggagagcagggagagagagagagacctgtcACTcctgccactgctgctgctgctgctgtctttTTTCAGGGCTCGGAACGccaaaccaccaccaccacacaaaCAACCACACAAGCCACCTCACCGCACCGCTATGGAGGCAGCTATAAACACACTGGTGGGCCAGTTCAAGACCTTCGCAGGGGGCGACGGGCGCGGCGACACGCTGAGCCGAGACGAGTTCCGCAGCCTGGTGTCCTCGCAGCTGCCCACCTTTGTCAAGAACTCCAGTGACCCGGCAGCGGTGGACCAGCTCATGAGCTCATTGGACGAGAACAATGACGGCGAGCTCACCTTCCTGGAATTCTGGCAGTTGATTGGCCGTCTGGCGAGCAAGCAGGCGGGCTTCAGCTAATTGTGCCTGGGAGCTGGCTGCCATGTGGGGaactcactctgtctctctctctctgcctgttccactgagatggctctcTTGTGTCGTGGCTTTGTTTGGTTACTGAATAAATGACCACCTGGTCTACACTATGGGAAGATTTAAAGTGTCTCTGTGTTCCTCCTTGGGGTGGGTCCAACAGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012374 False 261 mRNA 0.61 2 17127812 17129154
TU171327 True 1504 TUCP 0.50 3 17126013 17129339

Neighbor

gene id symbol gene type direction distance location
AMCG00012368 NA coding upstream 62960 17056530 ~ 17063053 (+)
AMCG00012370 NA coding upstream 74967 17042195 ~ 17051046 (+)
AMCG00012367 NA coding upstream 96925 17022659 ~ 17029088 (+)
AMCG00012369 NA coding upstream 128949 16993479 ~ 16997064 (+)
AMCG00012366 NA coding upstream 141019 16977572 ~ 16984994 (+)
AMCG00012375 NA coding downstream 3223 17132562 ~ 17133006 (+)
AMCG00012376 NA coding downstream 30106 17159445 ~ 17168083 (+)
AMCG00012380 NA coding downstream 55891 17185230 ~ 17193976 (+)
AMCG00012381 NA coding downstream 67100 17196439 ~ 17198701 (+)
AMCG00012378 NA coding downstream 92044 17221383 ~ 17222414 (+)
G136295 LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599 non-coding upstream 147800 16957458 ~ 16978213 (+)
G136297 NA non-coding upstream 168718 16956689 ~ 16957295 (+)
G136286 NA non-coding upstream 211318 16912235 ~ 16914695 (+)
G136237 NA non-coding upstream 218908 16842567 ~ 16907105 (+)
G136236 NA non-coding upstream 294211 16829050 ~ 16831802 (+)
G136351 NA non-coding downstream 35637 17164976 ~ 17172106 (+)
G136436 NA non-coding downstream 160806 17290145 ~ 17290529 (+)
G136444 NA non-coding downstream 171188 17300527 ~ 17304999 (+)
G136457 NA non-coding downstream 201455 17330794 ~ 17332570 (+)
G136458 NA non-coding downstream 210239 17339578 ~ 17340736 (+)
G136296 NA other upstream 125924 16963330 ~ 17000089 (+)
G136258 NA other upstream 250413 16871838 ~ 16875600 (+)
G136255 NA other upstream 258565 16866537 ~ 16867448 (+)
G136245 NA other upstream 262420 16811706 ~ 16863593 (+)
AMCG00012351 NA other upstream 360905 16733426 ~ 16765108 (+)
AMCG00012387 NA other downstream 255597 17384936 ~ 17388799 (+)
G136489 NA other downstream 282422 17411761 ~ 17476097 (+)
G136499 NA other downstream 330145 17459484 ~ 17466059 (+)
AMCG00012401 adar other downstream 380033 17509372 ~ 17522821 (+)
G136558 NA other downstream 418029 17547368 ~ 17547968 (+)

Expression


Co-expression Network