AMCG00012376


Basic Information

Item Value
gene id AMCG00012376
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17159445 ~ 17168083 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012376
TTGCAGTCTTGTCGGTGGTCAGAAGGAAAACGATGCGTTAAAGAAAAATGCCCAAAACCACAAAAGACTGGATTATAGAGACTCTGGAAAATCTCGTAGACGAAGATCTGAAGAAATTTAAGATGAAATTGTGCGATTGTCCAACCGAGCCCAAAATCCGCAAGAGAGCGATTTATAATGCCGACTTTCTGGACCTGGCAGACAAACTAGTGAGCACTTACACCGAGTACAGAGCTGCGGACGTGACTGTGGAGGTGTTAGAAAGCATCGGCCTCATGCAACAAGCTGCCGATCTGAGAAATGGCATGAAATCATCTGccatagaaaaacacaaacactgtgttATTGCAGACAATGAAAAGCTGGTTGAGTATAACAGCCTGCCGTGGGAGAGTGTCCCGATTTCTGAGCGCTATACGCCCCTGCTGATGGTTCGATCCCAACAGCCTTTCGAAGACCAAGTACACGAGTTGATGCGAAGAGGCAGCCGTCAAAAGACAGCCGTGGTCACAAACAGTCATCTTGACCCTTCGATAGGGGAGATACTGAAGCGCCCGGACAAAATCCTCTTTGTTGTCGACGGATTTGATGAGTTCAGATTTTCCATCGGTCAACCTCTACACGAGCTGTGCAGGAAGACGGACGAACCCAGCGCTGTTGACAACTTGCTCGCTAGTTTGCTGAGAAGGAGGCTGCTGCCAGAGGCGTGCTTGATCCTCACCACTCGCCCCTCTTCCTTGGAACATCTGAAGGATATGAAGCCAGATGGCTGCTTTGAGATCATGGGCTTCCCGGAAGAGCACCtttacatGATACTCAACTCGGAGACGAGGGGGTCGTCCTTCTCTGTCCTGCACTACAGCGGGCTGACTGTCGGATCACATTTTTGGAcCTCATGAATACAGGAATAACCGATGAGGCCATGCCAGGACTAGCAGCTGCAATAGCTCAAAACAAGTCACTTCAAGAACTGGATTTGTtctcaaataaaatcacagacaaATCAATTCCACACATTAAACACATGGCACTGAAGTGTCCAACACTGGAAGCAGTTGTattaGACACTATATTTTCTGAAGAAGGAAGACAACTTTTGGATAATTTGACATCTGAGAAATCTGGATTTCATGTCCAGTGGACATGGAATGATTACAGCTGGTAAAACCTTGGTGTGATTCATAAAGTTGTGAAAAGTTACCTATtagcttttaatttgttttaaaatcaaacaaaatgtgccTGTGAAGCACCAgacatttaatatatacttttatagtTGCCTATGGaattattcacacccttcatagactacaatgggttttagcaaaataaatgcaaatgtacattCAGCATTTGTTGcttaaattgattaaaacagTAATATTTGTCTGGGGATCTTCTGTATCGCTGTATCCTGTTTCTCCATATTGTATTACcattatacaataaacatatatgggtcttcctgatgagttgtcaggcagaaacagAACTTCCACTCATCTCATGACAGACATCTGGGTCTCTTATCTGTCTCTCCTGTccggtctgcataaaagtgcctgtagtttgtaacgtctctaagactgttcttgagatcacctcttgaacctcttccttgcagctgcttgtaataaattatttatgATTGACCGTATATCTCTCTCTGGTTCATATTCAACTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012376 True 1688 mRNA 0.43 6 17159445 17168083

Neighbor

gene id symbol gene type direction distance location
AMCG00012375 NA coding upstream 26439 17132562 ~ 17133006 (+)
AMCG00012368 NA coding upstream 96392 17056530 ~ 17063053 (+)
AMCG00012370 NA coding upstream 108399 17042195 ~ 17051046 (+)
AMCG00012367 NA coding upstream 130357 17022659 ~ 17029088 (+)
AMCG00012369 NA coding upstream 162381 16993479 ~ 16997064 (+)
AMCG00012380 NA coding downstream 17147 17185230 ~ 17193976 (+)
AMCG00012381 NA coding downstream 28356 17196439 ~ 17198701 (+)
AMCG00012378 NA coding downstream 53300 17221383 ~ 17222414 (+)
AMCG00012382 NA coding downstream 63262 17231345 ~ 17234934 (+)
AMCG00012379 NA coding downstream 70197 17238280 ~ 17242829 (+)
G136295 LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599 non-coding upstream 181232 16957458 ~ 16978213 (+)
G136297 NA non-coding upstream 202150 16956689 ~ 16957295 (+)
G136286 NA non-coding upstream 244750 16912235 ~ 16914695 (+)
G136237 NA non-coding upstream 252340 16842567 ~ 16907105 (+)
G136236 NA non-coding upstream 327643 16829050 ~ 16831802 (+)
G136436 NA non-coding downstream 122062 17290145 ~ 17290529 (+)
G136444 NA non-coding downstream 132444 17300527 ~ 17304999 (+)
G136457 NA non-coding downstream 162711 17330794 ~ 17332570 (+)
G136458 NA non-coding downstream 171495 17339578 ~ 17340736 (+)
G136486 NA non-coding downstream 233936 17402019 ~ 17402360 (+)
AMCG00012374 NA other upstream 30106 17126013 ~ 17129339 (+)
G136296 NA other upstream 159356 16963330 ~ 17000089 (+)
G136258 NA other upstream 283845 16871838 ~ 16875600 (+)
G136255 NA other upstream 291997 16866537 ~ 16867448 (+)
G136245 NA other upstream 295852 16811706 ~ 16863593 (+)
AMCG00012387 NA other downstream 216853 17384936 ~ 17388799 (+)
G136489 NA other downstream 243678 17411761 ~ 17476097 (+)
G136499 NA other downstream 291401 17459484 ~ 17466059 (+)
AMCG00012401 adar other downstream 341289 17509372 ~ 17522821 (+)
G136558 NA other downstream 379285 17547368 ~ 17547968 (+)

Expression


Co-expression Network