Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012381 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 17196439 ~ 17198701 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| id | description |
|---|---|
| K23765 | S100A11_13, S100C; protein S100-A11/13 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012381 | True | 541 | mRNA | 0.55 | 3 | 17196439 | 17198701 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012380 | NA | coding | upstream | 2463 | 17185230 ~ 17193976 (+) |
| AMCG00012376 | NA | coding | upstream | 28356 | 17159445 ~ 17168083 (+) |
| AMCG00012375 | NA | coding | upstream | 63433 | 17132562 ~ 17133006 (+) |
| AMCG00012368 | NA | coding | upstream | 133386 | 17056530 ~ 17063053 (+) |
| AMCG00012370 | NA | coding | upstream | 145393 | 17042195 ~ 17051046 (+) |
| AMCG00012378 | NA | coding | downstream | 22682 | 17221383 ~ 17222414 (+) |
| AMCG00012382 | NA | coding | downstream | 32644 | 17231345 ~ 17234934 (+) |
| AMCG00012379 | NA | coding | downstream | 39579 | 17238280 ~ 17242829 (+) |
| AMCG00012377 | NA | coding | downstream | 56711 | 17255412 ~ 17258599 (+) |
| AMCG00012389 | LOC107549236 | coding | downstream | 70365 | 17269066 ~ 17289895 (+) |
| G136351 | NA | non-coding | upstream | 24333 | 17164976 ~ 17172106 (+) |
| G136295 | LOC103039167,LOC108433880,LOC103372036,LOC105891956,LOC108256189,LOC108256188,LOC106605297,LOC104942599 | non-coding | upstream | 218226 | 16957458 ~ 16978213 (+) |
| G136297 | NA | non-coding | upstream | 239144 | 16956689 ~ 16957295 (+) |
| G136286 | NA | non-coding | upstream | 281744 | 16912235 ~ 16914695 (+) |
| G136237 | NA | non-coding | upstream | 289334 | 16842567 ~ 16907105 (+) |
| G136436 | NA | non-coding | downstream | 91444 | 17290145 ~ 17290529 (+) |
| G136444 | NA | non-coding | downstream | 101826 | 17300527 ~ 17304999 (+) |
| G136457 | NA | non-coding | downstream | 132093 | 17330794 ~ 17332570 (+) |
| G136458 | NA | non-coding | downstream | 140877 | 17339578 ~ 17340736 (+) |
| G136486 | NA | non-coding | downstream | 203318 | 17402019 ~ 17402360 (+) |
| AMCG00012374 | NA | other | upstream | 67100 | 17126013 ~ 17129339 (+) |
| G136296 | NA | other | upstream | 196350 | 16963330 ~ 17000089 (+) |
| G136258 | NA | other | upstream | 320839 | 16871838 ~ 16875600 (+) |
| G136255 | NA | other | upstream | 328991 | 16866537 ~ 16867448 (+) |
| G136245 | NA | other | upstream | 332846 | 16811706 ~ 16863593 (+) |
| AMCG00012387 | NA | other | downstream | 186235 | 17384936 ~ 17388799 (+) |
| G136489 | NA | other | downstream | 213060 | 17411761 ~ 17476097 (+) |
| G136499 | NA | other | downstream | 260783 | 17459484 ~ 17466059 (+) |
| AMCG00012401 | adar | other | downstream | 310671 | 17509372 ~ 17522821 (+) |
| G136558 | NA | other | downstream | 348667 | 17547368 ~ 17547968 (+) |
