AMCG00012402


Basic Information

Item Value
gene id AMCG00012402
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17676665 ~ 17679965 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012402
ATGGGAGTCTGGAAATACCAATCACCACTCCTCCTTTTCCTCGTCCTGTGGGGGGCGGTGCAGGGGCATTTGTTGCGGCGCTGCGTATGGTTCGAGGAGGAGGACGGGCAGGGTGACATTGGGGGGGTGGTCCCCTGCACCCTGGAGCCGGGGCAGGGGCCCTGGGCGGAGTGCGACAACGTGACGGACCTCGCCCTCGACCTGAGAGAGGTGCCCCCTGCCGTCCGCACCCTCTGCCTGCAGCTGCGTGCCCCCTGGCTGGGCCCTGGTGCCTTCGCCCGCCTCCCCGAGCTGCGGTGGCTCCAGGTGGGTGGGGTTTGGGGCGAGCAGGCGCTGATGGAAGCGGGGGCATTCGAGGGGCTGGCAGAGCTGCGGGGGCTGCAGCTGCGGGtctctgaaaacaaatgtcGCAACATCACCCTGAGCGCGGGGGCCTTCCGGGGCCTCCACCGCCTGGAGAACCTGACCCTGATCGGCGCACACCTGGCCCTGgccccccctgccctgctggcgCCCCTGGGCCGGCTGCGGTCTCTGCAGCTGCACAGCTGCTGCCTGAGGGAGCTGGGGGAGGCCGTGTGCCGGCTGGGCGGGCTGGGGGCGCTGGAGATGCTGGATCTGGCCCGGAACGACATCTCCTGGGTCCGGGGCGGGGGCTGCGCGGGCGGGGAGGGGTGGCCCGACGTGTCCGGCGTCCACACGCTCATCCTGACCCAGAACAAGGTGGTGCAGATCGAACCTGGGGCCCTGGCGCCCTTCGGGAACCTGACCAGGCTGTCCCTGTTGTTTCTCGCCGATGACCCAGCCCAAATCGGGGAGGCGGGACTGGTCGGTGCCAGGAGGCTGGAGTTGGGGGGTGAGATAATGGGCCAAACCCCCTCCATGAGCCTGACTGCACTGTGCCGGCTGGCCCTGCGGCTGTCCACCCACACCCTGCAGGTCTCCCACGCCCAGGTGCAGGGGCTCAGCGTGGGGGCGGCCGGGGCCTGCGCCGGGCTGGGGGAGCTGGTGTTGTCCTACGACCTGCTGGCGGAGCTGGACTTGGGTTTCTGGGCGCCGCTGGAGGGGCTGCGAGCGCTGGAGCTGTGGCACTGTGGTCTAGTCAACGCCAGTCTGTGCCAGGCCCGGCCGCAGGGGGCACCGACCTCCAACATCACCACCCTGCGTCTCCCCGGCAACCGCCTCACGAGTCTGGCAGGCCTCCAGTTCGCCTGCTTCCCCcggctggaggagctggacctGCAGCAGAACCAGATCAGCGACCTGGACCGCACGGCCTTCCGGGGCTTGCCTGTGCTGCGGGTGCTGAGCCTGCAGGGCAACCGGCTCACCCGGCTGGGCTGGGACTGGTTCACGGGGCTGTGGCGGCTGGAGGTGCTGCTGCTGGGCGACAACCCGCTGCAGAGGCTAGAGGAGGGTGTGTTCCGGGACCTGGCGGAGCTGCGGGAGCTGAGCCTGGGCCAGCTGGACTATGTGTACGAGCTGCACCTCAACCTGCTGTTCTACGGCTTCCCACGCAAGATCCGGCGGCTGGCCATCGACGCGGGCGAGGGGACGTACCTGGGGGTGGGCGATGCCCCGGGCCCAGACGCGCCGTTCGACCTGGAGCTGCGGGGTAACAAACTGATGTTCGAGGAGTGCCCCAGCCCGGTGTGGGCTGCTGTGCGGGCGCTGCGGGTGGGTGACGGGCAGATGATCTGCTGCGACCAGTTCATGGCGCCCTACTTCGCCGGCGCCGAGTCGCTGGAGTACCGCGCCAACCCCGAGCACCTGTTCACCGACTACAGCGGCCTGCACCACCTGCACGCGCTGCGCCGCCTCAAGCTCACCGACCTCAACTTCCACAACCAGTCCGACCTCAGCCTGCTGTTCCGCAACCTGACCAACCTGCGCTCCCTCCAGCTGCTCAACTGCCGCCTCAGCTTCCTGCCGGCGGCGATGTTCCGTGACCTGCACTCCCTGCGGCTGCTGCGCCTCTACAGCCAGAGCCCCCTGGTGCTGCTGGAGGGGCTGTTCCTCCCACTGCTCTCCCTGCACCTGCTGTTCTTCGACCGGCTGGACTTCCGCTGCGAGTGCAGCAACATGTGGCTGCTGGACTGGGCGGCAGCGGCGCCGGGGGTGCAGGTGGTGCACCTGGAGCAGCAGCACTGCGTGCGCCGTTACAGCCGGCTCGACTTTGTGTCCAGCATGGAGCGGCTGTGCCAGACGGACGCCGAGTTCCACTGCTTCCTGTCCACCGCCTCCTGCGTGGGCACCCTGCTGGTGGGGGCGCTGGGGTACCGGCTGGCCCGCTGGCACATGCTGGCGCTCTTCTTCTGGGCGCGGGGGCGGCTGGAGAGGAAGCTGGGGGGCCGGCGGCGAAGGAGGAGGAGCCGGGACTTCGAGGTGGGCAAGGGCATCGTGGACAACATCACCGACTGCGTGAACGCCAGCCGCTGCACCGTGTGCGTGCTGAGCCGCGCCTACCTGCGCAGCTACTGGTGCTCCCTGGAGCTGCGCCTCGCCACCTACCGGCTGCTGGCAGAACAACCCAGCACTCTTGTCCTCATCTTCCTGGAGGACATCGCCCCCTCCGAGCTTTCGGCCTATCACAGACTTGCAAAGATGGTGCAGAAGCGCATGTACCTGGACTGGCCGGAGGATGAGGGCGAGAGAGTGGCCTTCTGGGAGACACTGCGGCGCAAGATtggggggcaggaggaggaggaggaggaggaggaaggggagaaagagggaggagcCACACAGCCTGGGCAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012402 True 2760 mRNA 0.69 3 17676665 17679965

Neighbor

gene id symbol gene type direction distance location
AMCG00012403 NA coding upstream 309 17667343 ~ 17676356 (+)
AMCG00012405 NA coding upstream 13908 17657458 ~ 17662757 (+)
AMCG00012407 rit1,LOC107672884 coding upstream 55478 17614494 ~ 17621187 (+)
AMCG00012404 syt11 coding upstream 66762 17605733 ~ 17609903 (+)
AMCG00012406 ints3,LOC106588323 coding upstream 78593 17581376 ~ 17598072 (+)
AMCG00012410 NA coding downstream 3429 17683394 ~ 17688471 (+)
AMCG00012413 ssr2,LOC106570196,LOC106588555,LOC107748705 coding downstream 9153 17689118 ~ 17691283 (+)
AMCG00012412 NA coding downstream 20181 17700146 ~ 17713310 (+)
AMCG00012411 NA coding downstream 51032 17730997 ~ 17751455 (+)
AMCG00012418 NA coding downstream 126594 17806559 ~ 17814564 (+)
G136571 NA non-coding upstream 12495 17663433 ~ 17664170 (+)
G136568 NA non-coding upstream 27558 17648628 ~ 17649107 (+)
G136564 NA non-coding upstream 40704 17623113 ~ 17635961 (+)
G136539 NA non-coding upstream 187121 17489319 ~ 17489544 (+)
G136538 NA non-coding upstream 187838 17488350 ~ 17488827 (+)
G136718 NA non-coding downstream 220943 17900908 ~ 17901656 (+)
G136842 NA non-coding downstream 581932 18261897 ~ 18269507 (+)
G136848 NA non-coding downstream 615250 18295215 ~ 18317076 (+)
G136866 NA non-coding downstream 753605 18433570 ~ 18470784 (+)
G136873 NA non-coding downstream 793268 18473233 ~ 18474916 (+)
G136569 cks1b,LOC103032043,LOC108433716,LOC103358762 other upstream 23203 17649265 ~ 17653462 (+)
G136566 NA other upstream 29760 17645641 ~ 17646905 (+)
G136558 NA other upstream 128697 17547368 ~ 17547968 (+)
AMCG00012401 adar other upstream 153844 17509372 ~ 17522821 (+)
G136499 NA other upstream 210606 17459484 ~ 17466059 (+)
AMCG00012417 NA other downstream 75455 17755420 ~ 17760282 (+)
G136641 NA other downstream 84180 17764145 ~ 17767531 (+)
AMCG00012423 LOC102799202,LOC107564869 other downstream 112286 17792251 ~ 17795244 (+)
G136658 NA other downstream 160968 17840933 ~ 17843921 (+)
G136720 cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 other downstream 222867 17902832 ~ 17903810 (+)

Expression


Co-expression Network