Item | Value |
---|---|
gene id | AMCG00012407 |
gene name | rit1,LOC107672884 |
gene type | coding |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030138.1 |
NCBI id | CM030138.1 |
chromosome length | 24262032 |
location | 17614494 ~ 17621187 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
symbol | description |
---|---|
rit1 | Predicted to enable GTPase activity; calmodulin binding activity; and guanyl ribonucleotide binding activity. Acts upstream of or within embryonic viscerocranium morphogenesis and heart development. Predicted to be located in membrane. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in Noonan syndrome 8. Orthologous to several human genes including RIT1 (Ras like without CAAX 1). |
description |
---|
GTP-binding protein Rit1 |
id | name | namespace |
---|---|---|
GO:0007507 | heart development | biological_process |
GO:0007264 | small GTPase mediated signal transduction | biological_process |
GO:0006184 | obsolete GTP catabolic process | biological_process |
GO:0048703 | embryonic viscerocranium morphogenesis | biological_process |
GO:0016020 | membrane | cellular_component |
GO:0003924 | GTPase activity | molecular_function |
GO:0005525 | GTP binding | molecular_function |
id | description |
---|---|
K07832 | RIT1; Ras-like without CAAX 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
AMCG00012407 | True | 1715 | mRNA | 0.55 | 8 | 17614494 | 17621187 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00012404 | syt11 | coding | upstream | 4591 | 17605733 ~ 17609903 (+) |
AMCG00012406 | ints3,LOC106588323 | coding | upstream | 16422 | 17581376 ~ 17598072 (+) |
AMCG00012397 | NA | coding | upstream | 35723 | 17552586 ~ 17578771 (+) |
AMCG00012396 | ilf2,LOC106588321,LOC106569884 | coding | upstream | 76865 | 17529773 ~ 17537629 (+) |
AMCG00012395 | chrnb2,chrnb2b,LOC106575520,LOC104959165 | coding | upstream | 109922 | 17497454 ~ 17504572 (+) |
AMCG00012405 | NA | coding | downstream | 36271 | 17657458 ~ 17662757 (+) |
AMCG00012403 | NA | coding | downstream | 46156 | 17667343 ~ 17676356 (+) |
AMCG00012402 | NA | coding | downstream | 55478 | 17676665 ~ 17679965 (+) |
AMCG00012410 | NA | coding | downstream | 62207 | 17683394 ~ 17688471 (+) |
AMCG00012413 | ssr2,LOC106570196,LOC106588555,LOC107748705 | coding | downstream | 67931 | 17689118 ~ 17691283 (+) |
G136539 | NA | non-coding | upstream | 124950 | 17489319 ~ 17489544 (+) |
G136538 | NA | non-coding | upstream | 125667 | 17488350 ~ 17488827 (+) |
G136490 | NA | non-coding | upstream | 151809 | 17419215 ~ 17462685 (+) |
G136486 | NA | non-coding | upstream | 212134 | 17402019 ~ 17402360 (+) |
G136458 | NA | non-coding | upstream | 273758 | 17339578 ~ 17340736 (+) |
G136564 | NA | non-coding | downstream | 1926 | 17623113 ~ 17635961 (+) |
G136568 | NA | non-coding | downstream | 27441 | 17648628 ~ 17649107 (+) |
G136571 | NA | non-coding | downstream | 42246 | 17663433 ~ 17664170 (+) |
G136718 | NA | non-coding | downstream | 279721 | 17900908 ~ 17901656 (+) |
G136842 | NA | non-coding | downstream | 640710 | 18261897 ~ 18269507 (+) |
G136558 | NA | other | upstream | 66526 | 17547368 ~ 17547968 (+) |
AMCG00012401 | adar | other | upstream | 91673 | 17509372 ~ 17522821 (+) |
G136489 | NA | other | upstream | 138397 | 17411761 ~ 17476097 (+) |
G136499 | NA | other | upstream | 148435 | 17459484 ~ 17466059 (+) |
AMCG00012387 | NA | other | upstream | 225695 | 17384936 ~ 17388799 (+) |
G136566 | NA | other | downstream | 24454 | 17645641 ~ 17646905 (+) |
G136569 | cks1b,LOC103032043,LOC108433716,LOC103358762 | other | downstream | 28078 | 17649265 ~ 17653462 (+) |
AMCG00012417 | NA | other | downstream | 134233 | 17755420 ~ 17760282 (+) |
G136641 | NA | other | downstream | 142958 | 17764145 ~ 17767531 (+) |
AMCG00012423 | LOC102799202,LOC107564869 | other | downstream | 171064 | 17792251 ~ 17795244 (+) |