AMCG00012410


Basic Information

Item Value
gene id AMCG00012410
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17683394 ~ 17688471 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012410
tattattattattattattattattattattattattattacgtcAGTGTTTAGTGGGATTTTAATAACGAACCATCTGCTGCTGTCGAGAGAGTGAATCAGCCCGTCAGCTCAGCTAATAACTGattgatattatatttttctactAGTGACGTTCAGTTGCGTAATCAGTCTAGCAGGCATGCTGAGCCGAGCCGCAGTCCGAGTGAGCAGGGCGCTGCGTCGGAGAGTCGGGCACGAAGTCGAGGCTCATCTGCATCGACACGCCTTCACACGACCGAGCCCGAGGTCAGCGCTGGGCTTCGGGCCCCGCAGCATCCGGGGTATCACGGGGTTGCCCTGGGTGTCGTCTGACCCGGTTTCCCACGATTATAGCCTGCCCAACCCCAGCTGGACCCCGGAGTTGCGGCGGCTGTACGAGCATTACGAGGCCCGGCGGGACGAGGGCTGGAAGCGGCTGCCCAGCTACGGGCGCTCACGGAGTGCCGTGTGCATCTGCCAGTGTGGGCCGCGACTGGAGGGGCCACCTGGGCATGTCCACGGGGGTGCCATCGCCACCATCATTGACTCGGCAGTTGGCATCTGTGCCACCTACATCTCTGGCTTCGTCCTCACAGCCAACCTCAACATCAACTACCGCAGCCCGGTGTCCCTGGGCTCTGTGATTCTGCTGGACTGTAAGGTGGAGCGTGTCGAGGGCAGGAAGACCTTCGTGTCATGTCGGGTCACCAGCGCTGATGGGTCCACAGTGCATGCTGAAGCCACGGGCCTTTTTGTGTCGATCGACGTCAAACACCTGACGGAACAGTGACCAGGACACGTAACACGCAGCAGGCAACACACAAgacatgcaaacacaaaatcacGGCCTCCCAGTTACATGTTACACGTTACATGTTAAAGATGTATGACAAGCATTTTTCCAAGCTTGCAACAGCCAACTCTGCAATAATACAGATAAATTGTGCCATGTAGAATCCCCTGCACCAGATCTGAGTTCTCGTCTTCCCCACGTAGCAAAGGGTTTATTGTGTAAAAGCAGCTTGATTAGGCTTGGGGACTGTTTCCACTGTTCCATCTT

Function

GO: NA

KEGG:

id description
K16339 THEM4, CTMP; acyl-coenzyme A thioesterase THEM4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012410 True 1081 mRNA 0.54 7 17683394 17688471

Neighbor

gene id symbol gene type direction distance location
AMCG00012402 NA coding upstream 3429 17676665 ~ 17679965 (+)
AMCG00012403 NA coding upstream 7038 17667343 ~ 17676356 (+)
AMCG00012405 NA coding upstream 20637 17657458 ~ 17662757 (+)
AMCG00012407 rit1,LOC107672884 coding upstream 62207 17614494 ~ 17621187 (+)
AMCG00012404 syt11 coding upstream 73491 17605733 ~ 17609903 (+)
AMCG00012413 ssr2,LOC106570196,LOC106588555,LOC107748705 coding downstream 647 17689118 ~ 17691283 (+)
AMCG00012412 NA coding downstream 11675 17700146 ~ 17713310 (+)
AMCG00012411 NA coding downstream 42526 17730997 ~ 17751455 (+)
AMCG00012418 NA coding downstream 118088 17806559 ~ 17814564 (+)
AMCG00012428 NA coding downstream 249466 17937937 ~ 17941562 (+)
G136571 NA non-coding upstream 19224 17663433 ~ 17664170 (+)
G136568 NA non-coding upstream 34287 17648628 ~ 17649107 (+)
G136564 NA non-coding upstream 47433 17623113 ~ 17635961 (+)
G136539 NA non-coding upstream 193850 17489319 ~ 17489544 (+)
G136538 NA non-coding upstream 194567 17488350 ~ 17488827 (+)
G136718 NA non-coding downstream 212437 17900908 ~ 17901656 (+)
G136842 NA non-coding downstream 573426 18261897 ~ 18269507 (+)
G136848 NA non-coding downstream 606744 18295215 ~ 18317076 (+)
G136866 NA non-coding downstream 745099 18433570 ~ 18470784 (+)
G136873 NA non-coding downstream 784762 18473233 ~ 18474916 (+)
G136569 cks1b,LOC103032043,LOC108433716,LOC103358762 other upstream 29932 17649265 ~ 17653462 (+)
G136566 NA other upstream 36489 17645641 ~ 17646905 (+)
G136558 NA other upstream 135426 17547368 ~ 17547968 (+)
AMCG00012401 adar other upstream 160573 17509372 ~ 17522821 (+)
G136499 NA other upstream 217335 17459484 ~ 17466059 (+)
AMCG00012417 NA other downstream 66949 17755420 ~ 17760282 (+)
G136641 NA other downstream 75674 17764145 ~ 17767531 (+)
AMCG00012423 LOC102799202,LOC107564869 other downstream 103780 17792251 ~ 17795244 (+)
G136658 NA other downstream 152462 17840933 ~ 17843921 (+)
G136720 cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 other downstream 214361 17902832 ~ 17903810 (+)

Expression


Co-expression Network