AMCG00012412


Basic Information

Item Value
gene id AMCG00012412
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17700146 ~ 17713310 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012412
tccagatctctctctctctctctctctctctctctctctctctctataacCACACCTCGCTGGGCGGTGTGCTCAGGCAGTGGCTTTGAGTAACCAGactgtttcctgttttaatCAACTCGCAGCtctgaaatacacatttccCCCCTCCCATCGCGACGCACAGCCGACTTCTCCTGCATTGGACGGACGCCCCCCAGACCTGCAGCGACGAGCCTCTACAGGTGGGCTCCACACTCCTCTGCTGCtcatcctcctctctctctctctccctctctccctcttccccacACGCACGGCCGTCTCTCCGGTAGGATCCGTCACCGCAGCCCCGGCGCGCAGCTCCTCACGCAGgtccAGTCCAGTGGGGTCCGGTGCAGTATGCAGTAGTGCCGTCCAGGGCTGGCCGTGTTGAGAGATGTCTCTGTTTAAGCTGGAGAATGTGGAAGACCTGTATGAGATTGGGGAAGTGCTGGGCAGcgGGCACTTCGGGCAGGTGCGGGAGGTGCGGGAGCGGGCGACGGGCACGCCGTGGGCGGGCAAGTTCCTGAAGCTGCGGCGGGGCGCGGGCAGCCGGCTGGGGATAGAGAGGGGCAGCGTGGAGCGCGAGGTGGAGGTGCTGGCCGCCCTGCAGCACACCAACGTCATGGCCCTGAAGGACGTGTTCGAGAGCCGGGCCGAGGTGGTGCTCATCCTGGAGCtGATCCAGGGTGGGGAGCTGTTTGACTTCATCGCGGAGAAGGAGAGTCTGTCCGAAGGCGACGCCATCCAGTTCATGAAGCAGATCCTGTCGGCCGCCGCCTTCATGCACGCCAAGCGCATCGCCCACTTCGACCTGAAGCCGGAGAACATCATGCTACTGGACAAGGCCGTCCCGAACCCACACATCAAGCTCGTGGACTTCGGCCTGGCCCACAAGCtggaggagggggtggagtACAAGAGCATGTGTGGCACCCCCCAGTACATCGctcctgAGGTGATCAACTTTGAGCCGCTGACCATGGCTGCTGACATGTGGCTCAGTGGTCTATCCCCCTTCCAGGGCGACACGGACGAGGAGACGCTAACGAACATTGTGGAAGGGAACTACGAGTTTGACGAGCAGCACTTCAGGCAGACCAGTGACCTGGCCAAGGGCTTCATCCAGACGCTGCTGgtctccTATAAGATGGTGTGGGCGTGTAACAGACTGTGTCATCTGCATCTGCTGTGCAAGAGTTCAGCAAAGGCAGGAGAGGAGCTGgtgagatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012412 True 1255 mRNA 0.61 8 17700146 17713310

Neighbor

gene id symbol gene type direction distance location
AMCG00012413 ssr2,LOC106570196,LOC106588555,LOC107748705 coding upstream 8863 17689118 ~ 17691283 (+)
AMCG00012410 NA coding upstream 11675 17683394 ~ 17688471 (+)
AMCG00012402 NA coding upstream 20181 17676665 ~ 17679965 (+)
AMCG00012403 NA coding upstream 23790 17667343 ~ 17676356 (+)
AMCG00012405 NA coding upstream 37389 17657458 ~ 17662757 (+)
AMCG00012411 NA coding downstream 17687 17730997 ~ 17751455 (+)
AMCG00012418 NA coding downstream 93249 17806559 ~ 17814564 (+)
AMCG00012428 NA coding downstream 224627 17937937 ~ 17941562 (+)
AMCG00012429 NA coding downstream 289329 18002639 ~ 18006774 (+)
AMCG00012432 NA coding downstream 449266 18162576 ~ 18169744 (+)
G136571 NA non-coding upstream 35976 17663433 ~ 17664170 (+)
G136568 NA non-coding upstream 51039 17648628 ~ 17649107 (+)
G136564 NA non-coding upstream 64185 17623113 ~ 17635961 (+)
G136539 NA non-coding upstream 210602 17489319 ~ 17489544 (+)
G136538 NA non-coding upstream 211319 17488350 ~ 17488827 (+)
G136718 NA non-coding downstream 187598 17900908 ~ 17901656 (+)
G136842 NA non-coding downstream 548587 18261897 ~ 18269507 (+)
G136848 NA non-coding downstream 581905 18295215 ~ 18317076 (+)
G136866 NA non-coding downstream 720260 18433570 ~ 18470784 (+)
G136873 NA non-coding downstream 759923 18473233 ~ 18474916 (+)
G136569 cks1b,LOC103032043,LOC108433716,LOC103358762 other upstream 46684 17649265 ~ 17653462 (+)
G136566 NA other upstream 53241 17645641 ~ 17646905 (+)
G136558 NA other upstream 152178 17547368 ~ 17547968 (+)
AMCG00012401 adar other upstream 177325 17509372 ~ 17522821 (+)
G136499 NA other upstream 234087 17459484 ~ 17466059 (+)
AMCG00012417 NA other downstream 42110 17755420 ~ 17760282 (+)
G136641 NA other downstream 50835 17764145 ~ 17767531 (+)
AMCG00012423 LOC102799202,LOC107564869 other downstream 78941 17792251 ~ 17795244 (+)
G136658 NA other downstream 127623 17840933 ~ 17843921 (+)
G136720 cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 other downstream 189522 17902832 ~ 17903810 (+)

Expression


Co-expression Network