Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012417 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 17755420 ~ 17760282 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0043167 | ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012417 | True | 435 | mRNA | 0.61 | 4 | 17755706 | 17760282 |
| TU171766 | False | 350 | TUCP | 0.61 | 4 | 17755420 | 17757687 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012411 | NA | coding | upstream | 3965 | 17730997 ~ 17751455 (+) |
| AMCG00012412 | NA | coding | upstream | 42110 | 17700146 ~ 17713310 (+) |
| AMCG00012413 | ssr2,LOC106570196,LOC106588555,LOC107748705 | coding | upstream | 64137 | 17689118 ~ 17691283 (+) |
| AMCG00012410 | NA | coding | upstream | 66949 | 17683394 ~ 17688471 (+) |
| AMCG00012402 | NA | coding | upstream | 75455 | 17676665 ~ 17679965 (+) |
| AMCG00012418 | NA | coding | downstream | 46277 | 17806559 ~ 17814564 (+) |
| AMCG00012428 | NA | coding | downstream | 177655 | 17937937 ~ 17941562 (+) |
| AMCG00012429 | NA | coding | downstream | 242357 | 18002639 ~ 18006774 (+) |
| AMCG00012432 | NA | coding | downstream | 402294 | 18162576 ~ 18169744 (+) |
| AMCG00012431 | NA | coding | downstream | 413728 | 18174010 ~ 18179817 (+) |
| G136571 | NA | non-coding | upstream | 91250 | 17663433 ~ 17664170 (+) |
| G136568 | NA | non-coding | upstream | 106313 | 17648628 ~ 17649107 (+) |
| G136564 | NA | non-coding | upstream | 119459 | 17623113 ~ 17635961 (+) |
| G136539 | NA | non-coding | upstream | 265876 | 17489319 ~ 17489544 (+) |
| G136538 | NA | non-coding | upstream | 266593 | 17488350 ~ 17488827 (+) |
| G136718 | NA | non-coding | downstream | 140626 | 17900908 ~ 17901656 (+) |
| G136842 | NA | non-coding | downstream | 501615 | 18261897 ~ 18269507 (+) |
| G136848 | NA | non-coding | downstream | 534933 | 18295215 ~ 18317076 (+) |
| G136866 | NA | non-coding | downstream | 673288 | 18433570 ~ 18470784 (+) |
| G136873 | NA | non-coding | downstream | 712951 | 18473233 ~ 18474916 (+) |
| G136569 | cks1b,LOC103032043,LOC108433716,LOC103358762 | other | upstream | 101958 | 17649265 ~ 17653462 (+) |
| G136566 | NA | other | upstream | 108515 | 17645641 ~ 17646905 (+) |
| G136558 | NA | other | upstream | 207452 | 17547368 ~ 17547968 (+) |
| AMCG00012401 | adar | other | upstream | 232599 | 17509372 ~ 17522821 (+) |
| G136489 | NA | other | upstream | 279323 | 17411761 ~ 17476097 (+) |
| G136641 | NA | other | downstream | 3863 | 17764145 ~ 17767531 (+) |
| AMCG00012423 | LOC102799202,LOC107564869 | other | downstream | 31969 | 17792251 ~ 17795244 (+) |
| G136658 | NA | other | downstream | 80651 | 17840933 ~ 17843921 (+) |
| G136720 | cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 | other | downstream | 142550 | 17902832 ~ 17903810 (+) |
| AMCG00012439 | NA | other | downstream | 370002 | 18130284 ~ 18134381 (+) |
