AMCG00012418


Basic Information

Item Value
gene id AMCG00012418
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17806559 ~ 17814564 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012418
ATGGCAAAACCAGCCGCCGTTAGCTTCGATATCATACAGGTCCAAGTGTATTTAGACCGGCCCAACGTGGCTTTCAGTGGCAAAACAGCGGCTGGGTCCAGTTCGTTGTCTGTGAGAGCGGGGGACTCTGTGACTCTGTTCTGTAATGGATCAGACACAGACCTGGTGCTGTGGCAGACTCCAGACCACCATGTCTGTCACTTCAACTTTGGGAAATGTCTCCCAGCAGCAGCTTATGTGGACAGATTGGAATCTATAGGAGCCCTGAAGACGGGCAACTTCTCTGTGACCATTCACAACATCCAGCCCTCGGATGAGGGCCTATACGAGTGCTCCACAGATGAGCAGGCAGGCCAGAGCACGTTGCTTGGGGGAGAGACCACCTCGGTCTCCTATGGGGAGCCACTGAGACTCCGTCTGTACAGCAGGGAAGCTGTGACAGTGCAGTTTAACCCTGCAGGTGCCAGGGCCTCTCTCCCAGTGTGTGCTGTAGAGGGCGGCACCGTGACCCCTGACCCTGCGTATAGGACCCGAGTCTCCATGCGGGAGCAGGAGGTCACTCTGTCTGCACTGACCTTCACTGACCAGGGCTCCTACACAGTGCTGGACTCCTACACACAGTTACCCATCAGCACAATGACCATCAGTGTAAGAGCTCACACAGAAAACCTCACCCTGCAGGCTGgagcccctctctccctccctctccactcCCGTGCTGCAGTGGAGGTGCTGTTTGCTCCAGTAGCAGGGGGAGCCTCCATCTCAGTGTGGAGAGGAGTGGAGAGGGGCGCAGTGAACCACCTTGGCCCCGGGTACGAGCACAGAGTGTCAGTGCGGGACGGATCTCTGACCCTGCCTTCACTCACAGCAGCTGACCAGGGTCAGTACACCGTGAGGGAGTCCGGGACCAACCAGACCATCGGCACTGTCTCCGTCTCTGTGGCAGACCGCCCCCAGGACCAAACTGCCATCGCTGTGTCGGTTGCCCTCGCGCTCGTGCTGGTTCTGGGTCTGGGTCTGGCTGCCAGGGTCATGTGGAGGAAGTGGAAGGAATCTGGGGCCAATGAGAGAGGGACACCTGGACCCAGTGAGCAGCAGGATGTGGAGCTTGGACGTCTTACAGAGAAACTCACTGACACAGCACAGCCGCTACTCAAAAAAGAGGAGAGCCCAGAGAATAGCCAGTGCCCCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012418 True 1197 mRNA 0.58 6 17806559 17814564

Neighbor

gene id symbol gene type direction distance location
AMCG00012411 NA coding upstream 55104 17730997 ~ 17751455 (+)
AMCG00012412 NA coding upstream 93249 17700146 ~ 17713310 (+)
AMCG00012413 ssr2,LOC106570196,LOC106588555,LOC107748705 coding upstream 115276 17689118 ~ 17691283 (+)
AMCG00012410 NA coding upstream 118088 17683394 ~ 17688471 (+)
AMCG00012402 NA coding upstream 126594 17676665 ~ 17679965 (+)
AMCG00012428 NA coding downstream 123373 17937937 ~ 17941562 (+)
AMCG00012429 NA coding downstream 188075 18002639 ~ 18006774 (+)
AMCG00012432 NA coding downstream 348012 18162576 ~ 18169744 (+)
AMCG00012431 NA coding downstream 359446 18174010 ~ 18179817 (+)
AMCG00012440 anp32e,LOC100707939,LOC102193634,LOC102789185 coding downstream 415181 18229745 ~ 18237188 (+)
G136571 NA non-coding upstream 142389 17663433 ~ 17664170 (+)
G136568 NA non-coding upstream 157452 17648628 ~ 17649107 (+)
G136564 NA non-coding upstream 170598 17623113 ~ 17635961 (+)
G136539 NA non-coding upstream 317015 17489319 ~ 17489544 (+)
G136538 NA non-coding upstream 317732 17488350 ~ 17488827 (+)
G136718 NA non-coding downstream 86344 17900908 ~ 17901656 (+)
G136842 NA non-coding downstream 447333 18261897 ~ 18269507 (+)
G136848 NA non-coding downstream 480651 18295215 ~ 18317076 (+)
G136866 NA non-coding downstream 619006 18433570 ~ 18470784 (+)
G136873 NA non-coding downstream 658669 18473233 ~ 18474916 (+)
AMCG00012423 LOC102799202,LOC107564869 other upstream 11315 17792251 ~ 17795244 (+)
G136641 NA other upstream 39028 17764145 ~ 17767531 (+)
AMCG00012417 NA other upstream 46277 17755420 ~ 17760282 (+)
G136569 cks1b,LOC103032043,LOC108433716,LOC103358762 other upstream 153097 17649265 ~ 17653462 (+)
G136566 NA other upstream 159654 17645641 ~ 17646905 (+)
G136658 NA other downstream 26369 17840933 ~ 17843921 (+)
G136720 cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 other downstream 88268 17902832 ~ 17903810 (+)
AMCG00012439 NA other downstream 315720 18130284 ~ 18134381 (+)
G136864 psmb4 other downstream 570725 18385289 ~ 18388306 (+)
AMCG00012460 NA other downstream 724981 18539545 ~ 18544490 (+)

Expression


Co-expression Network