AMCG00012428


Basic Information

Item Value
gene id AMCG00012428
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17937937 ~ 17941562 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012428
ATGGAGTTCAATAAAGGGGTGTTTAAACTCATCCACAAGCACAGCAAGAGCCATGCACGCACCTGGCTGGGGGGCTTCCGCTTCCCTCAGGTAACAACTGACACTGTGAGACTGGGGGAGTGGGGGAGTCTCAGATCTAATGCGTTTATGTGGATTGATGGAAGCAGCTGGAGTTATGAGAACTGGTCTCCTGGGAACCCTGATAATACTAAGGGAAAGGAGCACTGCATCGAGATGAACTGGTCCAAGAATGAGAAGTGGAACGACCACGTCTGCACTGAACTCAAACCCTTTGTCTGCAAGATCCGCATTCCTACAGCTGAGGAGAGCAGAGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012428 True 339 mRNA 0.51 4 17937937 17941562

Neighbor

gene id symbol gene type direction distance location
AMCG00012418 NA coding upstream 123373 17806559 ~ 17814564 (+)
AMCG00012411 NA coding upstream 186482 17730997 ~ 17751455 (+)
AMCG00012412 NA coding upstream 224627 17700146 ~ 17713310 (+)
AMCG00012413 ssr2,LOC106570196,LOC106588555,LOC107748705 coding upstream 246654 17689118 ~ 17691283 (+)
AMCG00012410 NA coding upstream 249466 17683394 ~ 17688471 (+)
AMCG00012429 NA coding downstream 61077 18002639 ~ 18006774 (+)
AMCG00012432 NA coding downstream 221014 18162576 ~ 18169744 (+)
AMCG00012431 NA coding downstream 232448 18174010 ~ 18179817 (+)
AMCG00012440 anp32e,LOC100707939,LOC102193634,LOC102789185 coding downstream 288183 18229745 ~ 18237188 (+)
AMCG00012447 NA coding downstream 388362 18329924 ~ 18350901 (+)
G136718 NA non-coding upstream 36281 17900908 ~ 17901656 (+)
G136571 NA non-coding upstream 273767 17663433 ~ 17664170 (+)
G136568 NA non-coding upstream 288830 17648628 ~ 17649107 (+)
G136564 NA non-coding upstream 301976 17623113 ~ 17635961 (+)
G136539 NA non-coding upstream 448393 17489319 ~ 17489544 (+)
G136842 NA non-coding downstream 320335 18261897 ~ 18269507 (+)
G136848 NA non-coding downstream 353653 18295215 ~ 18317076 (+)
G136866 NA non-coding downstream 492008 18433570 ~ 18470784 (+)
G136873 NA non-coding downstream 531671 18473233 ~ 18474916 (+)
G136969 NA non-coding downstream 674336 18615898 ~ 18653598 (+)
G136720 cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 other upstream 34127 17902832 ~ 17903810 (+)
G136658 NA other upstream 94016 17840933 ~ 17843921 (+)
AMCG00012423 LOC102799202,LOC107564869 other upstream 142693 17792251 ~ 17795244 (+)
G136641 NA other upstream 170406 17764145 ~ 17767531 (+)
AMCG00012417 NA other upstream 177655 17755420 ~ 17760282 (+)
AMCG00012439 NA other downstream 188722 18130284 ~ 18134381 (+)
G136864 psmb4 other downstream 443727 18385289 ~ 18388306 (+)
AMCG00012460 NA other downstream 597983 18539545 ~ 18544490 (+)
AMCG00012471 NA other downstream 1105935 19047497 ~ 19053829 (+)
G137083 NA other downstream 1228186 19169748 ~ 19174421 (+)

Expression


Co-expression Network