AMCG00012432


Basic Information

Item Value
gene id AMCG00012432
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 18162576 ~ 18169744 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012432
GAGATGGACGCCGAGAACGGGGGGGTGTTTTTCGGCCAGAGGGAGGAGGACATGGGAATAGAAGGGGGCCTGAGCACTCGGGGGCCCTTCTCCTGCCCCGATTCAATCTACAGCGccagcccagagaaaaccctGGAGGAGTGGGCCATGGACCCCCACTGTGCGCTGAACGACAGCGAGTCGGAGGATGTCCTCCACACCATCATCAACCCCAACGACGTGTACCCCTCCTGCGGGGCTCCCCTGGAGTCAACCTCGGAGAGCGACAGCGGCATCTCTGATGACCCCCGGTCCGACAGCCCCCACGGGCCCCCCGCTGCCACCGCCCCTACCGTCTACCAGGTGGTGTACGACATCGGCAACGAGTGGAGCTCCCAGATGTTGATCCCCCAGTCTTGCATCGTCAACGAGCTGCCTCTGGTGCCGACGGGCAAATCCACTTCCGCCCTGTCAGTGCCCGCTGCCTCGCAAGATGCCAACAGCCTGGACAGCTTACCACTGTACCCAGATCTATGCCTGACAGAGGAGGAACAGAAGCTCCTGACCCAGGAAGGAATCTCTCTGCCCAGCAACCTGCCCCTTACCAAGGCTGAGGAGCGGATTCTGAAGAAGGTGAGGCGCAAGATCCGCAACAAGCAGTCGGCGCAGGACAGCCGGCGCAGGAAGAAGGAGGTGGCGGCCTGTTCGGCGCAGAACCACGAGCTCCAGAAGACTGTGGAGCAGCTGGAGAAGCACAACGTGTCTCTGTTGGCACAGCTGAGGGCACTGCAGTCCCTGATCAAGCAGACTGCAACCAAGGCCGCACAGACGGGCACCTGCATCATGATCATTATCTTCTCCCTGGCCCTGATCATCTTCCCCAGTTACAGCCCCTTCCTCTGGGGCCCGGCAGACGTAGAGGACAGCTACGCGCCTAAAGGAGTAATCTCCAGGAACATCCTGACCGACTCCGCCTCCTCCAGTCTTCCCGAAACTGGGGATGATGTCGTCGCTGCCGTTGGATATGGCCCCCTGCCCTTCTCCCCGGACACTGGCCAATCGGAATCTGCCGACCCGCCCCCCACGCTCCCACAGCAGCCAATCGAAACGCCGGAAGCCGCTCTCCAGGGGGACATGGCTCAGGATGAGGGCCAATCCAAGAATGGTTCATCGTTGCAGGCGGAAGACAGGACTAATCAGCTGGCACTGGACATGGGGCCCTCCAAAGCACAAGGGGGCGCCAGCATAGACTCTGCGAAACCTGCTCACGCTGACGAAATGTAG

Function

GO: NA

KEGG:

id description
K09048 CREB3; cyclic AMP-responsive element-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012432 True 1263 mRNA 0.61 9 18162576 18169744

Neighbor

gene id symbol gene type direction distance location
AMCG00012429 NA coding upstream 155802 18002639 ~ 18006774 (+)
AMCG00012428 NA coding upstream 221014 17937937 ~ 17941562 (+)
AMCG00012418 NA coding upstream 348012 17806559 ~ 17814564 (+)
AMCG00012411 NA coding upstream 411121 17730997 ~ 17751455 (+)
AMCG00012412 NA coding upstream 449266 17700146 ~ 17713310 (+)
AMCG00012431 NA coding downstream 4266 18174010 ~ 18179817 (+)
AMCG00012440 anp32e,LOC100707939,LOC102193634,LOC102789185 coding downstream 60001 18229745 ~ 18237188 (+)
AMCG00012447 NA coding downstream 160180 18329924 ~ 18350901 (+)
AMCG00012446 NA coding downstream 183267 18353011 ~ 18375993 (+)
AMCG00012454 selenbp1,LOC107588475,LOC107556087 coding downstream 220087 18389831 ~ 18401677 (+)
G136718 NA non-coding upstream 260920 17900908 ~ 17901656 (+)
G136571 NA non-coding upstream 498406 17663433 ~ 17664170 (+)
G136568 NA non-coding upstream 513469 17648628 ~ 17649107 (+)
G136564 NA non-coding upstream 526615 17623113 ~ 17635961 (+)
G136539 NA non-coding upstream 673032 17489319 ~ 17489544 (+)
G136842 NA non-coding downstream 92153 18261897 ~ 18269507 (+)
G136848 NA non-coding downstream 125471 18295215 ~ 18317076 (+)
G136866 NA non-coding downstream 263826 18433570 ~ 18470784 (+)
G136873 NA non-coding downstream 303489 18473233 ~ 18474916 (+)
G136969 NA non-coding downstream 446154 18615898 ~ 18653598 (+)
AMCG00012439 NA other upstream 28195 18130284 ~ 18134381 (+)
G136720 cct3,tcpg,LOC107597996,LOC107587818,LOC107741740,LOC107671634,LOC107704884 other upstream 258766 17902832 ~ 17903810 (+)
G136658 NA other upstream 318655 17840933 ~ 17843921 (+)
AMCG00012423 LOC102799202,LOC107564869 other upstream 367332 17792251 ~ 17795244 (+)
G136641 NA other upstream 395045 17764145 ~ 17767531 (+)
G136864 psmb4 other downstream 215545 18385289 ~ 18388306 (+)
AMCG00012460 NA other downstream 369801 18539545 ~ 18544490 (+)
AMCG00012471 NA other downstream 877753 19047497 ~ 19053829 (+)
G137083 NA other downstream 1000004 19169748 ~ 19174421 (+)
G137111 ctsk,LOC107689854,LOC107587836,LOC107741754,LOC108441922 other downstream 1067945 19237689 ~ 19238958 (+)

Expression


Co-expression Network